STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM187BProtein FAM187B; Family with sequence similarity 187 member B (369 aa)    
Predicted Functional Partners:
TMCO4
Transmembrane and coiled-coil domains 4; Belongs to the TMCO4 family
      
 0.824
OR7G3
Olfactory receptor 7G3; Odorant receptor; Olfactory receptors, family 7
      
 0.669
FAM171B
Protein FAM171B; Family with sequence similarity 171 member B; Belongs to the FAM171 family
      
 0.641
EFCAB13
EF-hand calcium-binding domain-containing protein 13; EF-hand calcium binding domain 13
      
 0.617
SPERT
Spermatid-associated protein; Spermatid associated
      
 0.613
ZNF80
Zinc finger protein 80; May be involved in transcriptional regulation; Zinc fingers C2H2-type
      
 0.595
SLC22A24
Solute carrier family 22 member 24
      
 0.592
RFPL1
Ret finger protein like 1; Ring finger proteins
      
 0.586
CERS5
Ceramide synthase 5; Dihydroceramide synthase. Catalyzes the acylation of sphingosine to form dihydroceramide, with high selectivity toward palmitoyl-CoA as acyl donor compared to stearoyl-CoA. Inhibited by fumonisin B1 (By similarity); CERS class homeoboxes
      
 0.550
TOMM40L
Mitochondrial import receptor subunit TOM40B; Potential channel-forming protein implicated in import of protein precursors into mitochondria; Belongs to the Tom40 family
      
 0.516
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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