MBD3L5 protein (human) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Homo sapiens

NCBI taxonomy Id: 9606
Other names: H. sapiens, human, man

Export your current network:

... as a bitmap image:

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file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

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same PNG format, but at higher resolution

... as a vector graphic:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DUXB	LEUTX	ENSP00000491301	ENSP00000380053	Double homeobox B.	Leucine twenty homeobox.	0.757
DUXB	MBD3L2	ENSP00000491301	ENSP00000370800	Double homeobox B.	methyl-CpG binding domain protein 3 like 2; Belongs to the MBD3L family.	0.549
DUXB	MBD3L3	ENSP00000491301	ENSP00000333183	Double homeobox B.	methyl-CpG binding domain protein 3 like 3.	0.547
DUXB	MBD3L5	ENSP00000491301	ENSP00000331435	Double homeobox B.	methyl-CpG binding domain protein 3 like 5.	0.499
DUXB	TRIM43	ENSP00000491301	ENSP00000272395	Double homeobox B.	Tripartite motif containing 43.	0.467
DUXB	ZSCAN4	ENSP00000491301	ENSP00000321963	Double homeobox B.	Zinc finger and SCAN domain-containing protein 4; Embryonic stem (ES) cell-specific transcription factor required to regulate ES cell pluripotency. Binds telomeres and plays a key role in genomic stability in ES cells by regulating telomere elongation. Acts as an activator of spontaneous telomere sister chromatid exchange (T-SCE) and telomere elongation in undifferentiated ES cells (By similarity).	0.503
LEUTX	DUXB	ENSP00000380053	ENSP00000491301	Leucine twenty homeobox.	Double homeobox B.	0.757
LEUTX	MBD3L2	ENSP00000380053	ENSP00000370800	Leucine twenty homeobox.	methyl-CpG binding domain protein 3 like 2; Belongs to the MBD3L family.	0.745
LEUTX	MBD3L3	ENSP00000380053	ENSP00000333183	Leucine twenty homeobox.	methyl-CpG binding domain protein 3 like 3.	0.640
LEUTX	MBD3L5	ENSP00000380053	ENSP00000331435	Leucine twenty homeobox.	methyl-CpG binding domain protein 3 like 5.	0.583
LEUTX	PRAMEF15	ENSP00000380053	ENSP00000365322	Leucine twenty homeobox.	PRAME family member 15; Belongs to the PRAME family.	0.538
LEUTX	PRAMEF25	ENSP00000380053	ENSP00000481683	Leucine twenty homeobox.	PRAME family member 25; Belongs to the PRAME family.	0.419
LEUTX	PRAMEF9	ENSP00000380053	ENSP00000485258	Leucine twenty homeobox.	PRAME family member 9.	0.414
LEUTX	TRIM43	ENSP00000380053	ENSP00000272395	Leucine twenty homeobox.	Tripartite motif containing 43.	0.726
LEUTX	ZSCAN4	ENSP00000380053	ENSP00000321963	Leucine twenty homeobox.	Zinc finger and SCAN domain-containing protein 4; Embryonic stem (ES) cell-specific transcription factor required to regulate ES cell pluripotency. Binds telomeres and plays a key role in genomic stability in ES cells by regulating telomere elongation. Acts as an activator of spontaneous telomere sister chromatid exchange (T-SCE) and telomere elongation in undifferentiated ES cells (By similarity).	0.671
MBD3L2	DUXB	ENSP00000370800	ENSP00000491301	methyl-CpG binding domain protein 3 like 2; Belongs to the MBD3L family.	Double homeobox B.	0.549
MBD3L2	LEUTX	ENSP00000370800	ENSP00000380053	methyl-CpG binding domain protein 3 like 2; Belongs to the MBD3L family.	Leucine twenty homeobox.	0.745
MBD3L2	MBD3L3	ENSP00000370800	ENSP00000333183	methyl-CpG binding domain protein 3 like 2; Belongs to the MBD3L family.	methyl-CpG binding domain protein 3 like 3.	0.960
MBD3L2	MBD3L4	ENSP00000370800	ENSP00000370801	methyl-CpG binding domain protein 3 like 2; Belongs to the MBD3L family.	methyl-CpG binding domain protein 3 like 4.	0.947
MBD3L2	MBD3L5	ENSP00000370800	ENSP00000331435	methyl-CpG binding domain protein 3 like 2; Belongs to the MBD3L family.	methyl-CpG binding domain protein 3 like 5.	0.955