STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM219BProtein FAM219B; Family with sequence similarity 219 member B (198 aa)    
Predicted Functional Partners:
C4orf19
Uncharacterized protein C4orf19; Chromosome 4 open reading frame 19
      
 0.563
SCAMP2
Secretory carrier-associated membrane protein 2; Functions in post-Golgi recycling pathways. Acts as a recycling carrier to the cell surface; Belongs to the SCAMP family
      
 0.559
C15orf39
Uncharacterized protein C15orf39; Chromosome 15 open reading frame 39
      
 0.556
FAM221A
Protein FAM221A; Family with sequence similarity 221 member A; Belongs to the FAM221 family
      
 0.529
UBL7
Ubiquitin-like protein 7; Ubiquitin like 7
    
 
 0.523
BSDC1
Bsd domain-containing protein 1; BSD domain containing 1
      
 0.519
LMAN1L
Protein ERGIC-53-like; Lectin, mannose binding 1 like
      
 0.518
GOLGA6A
Golgin subfamily a member 6a; Golgin A6 family member A; Belongs to the GOLGA6 family
      
 0.504
KATNBL1
Katanin regulatory subunit b1 like 1; KATNB1-like protein 1; Regulates microtubule-severing activity of KATNAL1 in a concentration-dependent manner in vitro
      
 0.469
COMMD4
COMM domain-containing protein 4; May modulate activity of cullin-RING E3 ubiquitin ligase (CRL) complexes. Down-regulates activation of NF-kappa-B
      
 0.457
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, human, man
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