C20orf96 protein (human) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Homo sapiens

NCBI taxonomy Id: 9606
Other names: H. sapiens, human, man

Export your current network:

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same PNG format, but at higher resolution

... as a vector graphic:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C11orf98	C19orf47	ENSP00000432523	ENSP00000463159	Uncharacterized protein C11orf98; Chromosome 11 open reading frame 98.	Uncharacterized protein C19orf47; Chromosome 19 open reading frame 47.	0.433
C11orf98	C20orf96	ENSP00000432523	ENSP00000353470	Uncharacterized protein C11orf98; Chromosome 11 open reading frame 98.	Uncharacterized protein C20orf96; Chromosome 20 open reading frame 96.	0.422
C11orf98	C3orf49	ENSP00000432523	ENSP00000295896	Uncharacterized protein C11orf98; Chromosome 11 open reading frame 98.	Putative uncharacterized protein C3orf49; Chromosome 3 open reading frame 49.	0.533
C11orf98	C4orf50	ENSP00000432523	ENSP00000437121	Uncharacterized protein C11orf98; Chromosome 11 open reading frame 98.	Uncharacterized protein C4orf50; Chromosome 4 open reading frame 50.	0.653
C11orf98	C4orf54	ENSP00000432523	ENSP00000427555	Uncharacterized protein C11orf98; Chromosome 11 open reading frame 98.	Uncharacterized protein C4orf54; Chromosome 4 open reading frame 54.	0.606
C19orf47	C11orf98	ENSP00000463159	ENSP00000432523	Uncharacterized protein C19orf47; Chromosome 19 open reading frame 47.	Uncharacterized protein C11orf98; Chromosome 11 open reading frame 98.	0.433
C19orf47	C20orf96	ENSP00000463159	ENSP00000353470	Uncharacterized protein C19orf47; Chromosome 19 open reading frame 47.	Uncharacterized protein C20orf96; Chromosome 20 open reading frame 96.	0.455
C19orf47	C3orf49	ENSP00000463159	ENSP00000295896	Uncharacterized protein C19orf47; Chromosome 19 open reading frame 47.	Putative uncharacterized protein C3orf49; Chromosome 3 open reading frame 49.	0.567
C19orf47	C4orf50	ENSP00000463159	ENSP00000437121	Uncharacterized protein C19orf47; Chromosome 19 open reading frame 47.	Uncharacterized protein C4orf50; Chromosome 4 open reading frame 50.	0.676
C19orf47	C4orf54	ENSP00000463159	ENSP00000427555	Uncharacterized protein C19orf47; Chromosome 19 open reading frame 47.	Uncharacterized protein C4orf54; Chromosome 4 open reading frame 54.	0.664
C19orf47	C9orf85	ENSP00000463159	ENSP00000334289	Uncharacterized protein C19orf47; Chromosome 19 open reading frame 47.	Uncharacterized protein C9orf85; Chromosome 9 open reading frame 85.	0.444
C20orf96	C11orf98	ENSP00000353470	ENSP00000432523	Uncharacterized protein C20orf96; Chromosome 20 open reading frame 96.	Uncharacterized protein C11orf98; Chromosome 11 open reading frame 98.	0.422
C20orf96	C19orf47	ENSP00000353470	ENSP00000463159	Uncharacterized protein C20orf96; Chromosome 20 open reading frame 96.	Uncharacterized protein C19orf47; Chromosome 19 open reading frame 47.	0.455
C20orf96	C3orf49	ENSP00000353470	ENSP00000295896	Uncharacterized protein C20orf96; Chromosome 20 open reading frame 96.	Putative uncharacterized protein C3orf49; Chromosome 3 open reading frame 49.	0.547
C20orf96	C4orf50	ENSP00000353470	ENSP00000437121	Uncharacterized protein C20orf96; Chromosome 20 open reading frame 96.	Uncharacterized protein C4orf50; Chromosome 4 open reading frame 50.	0.659
C20orf96	C4orf54	ENSP00000353470	ENSP00000427555	Uncharacterized protein C20orf96; Chromosome 20 open reading frame 96.	Uncharacterized protein C4orf54; Chromosome 4 open reading frame 54.	0.636
C20orf96	C9orf85	ENSP00000353470	ENSP00000334289	Uncharacterized protein C20orf96; Chromosome 20 open reading frame 96.	Uncharacterized protein C9orf85; Chromosome 9 open reading frame 85.	0.424
C20orf96	CFAP74	ENSP00000353470	ENSP00000417061	Uncharacterized protein C20orf96; Chromosome 20 open reading frame 96.	Cilia- and flagella-associated protein 74; As part of the central apparatus of the cilium axoneme may play a role in cilium movement.	0.578
C20orf96	SHLD1	ENSP00000353470	ENSP00000305875	Uncharacterized protein C20orf96; Chromosome 20 open reading frame 96.	Shieldin complex subunit 1; Component of the shieldin complex, which plays an important role in repair of DNA double-stranded breaks (DSBs). During G1 and S phase of the cell cycle, the complex functions downstream of TP53BP1 to promote non-homologous end joining (NHEJ) and suppress DNA end resection. Mediates various NHEJ-dependent processes including immunoglobulin class-switch recombination, and fusion of unprotected telomeres.	0.445
C20orf96	SHLD2	ENSP00000353470	ENSP00000298786	Uncharacterized protein C20orf96; Chromosome 20 open reading frame 96.	Shieldin complex subunit 2; Component of the shieldin complex, which plays an important role in repair of DNA double-stranded breaks (DSBs). During G1 and S phase of the cell cycle, the complex functions downstream of TP53BP1 to promote non-homologous end joining (NHEJ) and suppress DNA end resection. Mediates various NHEJ-dependent processes including immunoglobulin class-switch recombination, and fusion of unprotected telomeres ; Belongs to the SHLD2 family.	0.477