FAM229B protein (human) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

FAM229B

Protein FAM229B; Family with sequence similarity 229 member B; Belongs to the FAM229 family. (80 aa)

Predicted Functional Partners:

LRCOL1

0.702

C7orf31

0.613

NPIPB9

0.571

TMEM60

0.569

SPATA24

0.554

MAGEE2

0.543

OR2AK2

0.522

FSCB

0.518

IQCF1

0.496

CABS1

0.477

Your Current Organism:

Homo sapiens

NCBI taxonomy Id: 9606
Other names: H. sapiens, human, man

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C7orf31	CABS1	ENSP00000283905	ENSP00000273936	Uncharacterized protein C7orf31; Chromosome 7 open reading frame 31.	Calcium-binding and spermatid-specific protein 1; Calcium binding protein, spermatid associated 1.	0.531
C7orf31	FAM229B	ENSP00000283905	ENSP00000357645	Uncharacterized protein C7orf31; Chromosome 7 open reading frame 31.	Protein FAM229B; Family with sequence similarity 229 member B; Belongs to the FAM229 family.	0.613
C7orf31	FSCB	ENSP00000283905	ENSP00000344579	Uncharacterized protein C7orf31; Chromosome 7 open reading frame 31.	Fibrous sheath CABYR-binding protein; May be involved in the later stages of fibrous sheath biogenesis and spermatozoa capacitation. Inhibits ROPN1 and ROPN1L SUMOylation. Binds calcium.	0.514
C7orf31	LRCOL1	ENSP00000283905	ENSP00000479730	Uncharacterized protein C7orf31; Chromosome 7 open reading frame 31.	Leucine-rich colipase-like protein 1; Leucine rich colipase like 1.	0.705
C7orf31	SPATA24	ENSP00000283905	ENSP00000414920	Uncharacterized protein C7orf31; Chromosome 7 open reading frame 31.	Spermatogenesis-associated protein 24; Binds DNA with high affinity but does not bind to TATA boxes. Synergises with GMNN and TBP in activation of TATA box-containing promoters and with GMNN and TBPL1 in activation of the NF1 TATA-less promoter. May play a role in cytoplasm movement and removal during spermiogenesis (By similarity).	0.485
CABS1	C7orf31	ENSP00000273936	ENSP00000283905	Calcium-binding and spermatid-specific protein 1; Calcium binding protein, spermatid associated 1.	Uncharacterized protein C7orf31; Chromosome 7 open reading frame 31.	0.531
CABS1	FAM229B	ENSP00000273936	ENSP00000357645	Calcium-binding and spermatid-specific protein 1; Calcium binding protein, spermatid associated 1.	Protein FAM229B; Family with sequence similarity 229 member B; Belongs to the FAM229 family.	0.477
CABS1	FSCB	ENSP00000273936	ENSP00000344579	Calcium-binding and spermatid-specific protein 1; Calcium binding protein, spermatid associated 1.	Fibrous sheath CABYR-binding protein; May be involved in the later stages of fibrous sheath biogenesis and spermatozoa capacitation. Inhibits ROPN1 and ROPN1L SUMOylation. Binds calcium.	0.472
CABS1	LRCOL1	ENSP00000273936	ENSP00000479730	Calcium-binding and spermatid-specific protein 1; Calcium binding protein, spermatid associated 1.	Leucine-rich colipase-like protein 1; Leucine rich colipase like 1.	0.581
FAM229B	C7orf31	ENSP00000357645	ENSP00000283905	Protein FAM229B; Family with sequence similarity 229 member B; Belongs to the FAM229 family.	Uncharacterized protein C7orf31; Chromosome 7 open reading frame 31.	0.613
FAM229B	CABS1	ENSP00000357645	ENSP00000273936	Protein FAM229B; Family with sequence similarity 229 member B; Belongs to the FAM229 family.	Calcium-binding and spermatid-specific protein 1; Calcium binding protein, spermatid associated 1.	0.477
FAM229B	FSCB	ENSP00000357645	ENSP00000344579	Protein FAM229B; Family with sequence similarity 229 member B; Belongs to the FAM229 family.	Fibrous sheath CABYR-binding protein; May be involved in the later stages of fibrous sheath biogenesis and spermatozoa capacitation. Inhibits ROPN1 and ROPN1L SUMOylation. Binds calcium.	0.518
FAM229B	IQCF1	ENSP00000357645	ENSP00000307958	Protein FAM229B; Family with sequence similarity 229 member B; Belongs to the FAM229 family.	IQ domain-containing protein F1; Involved in sperm capacitation and acrosome reaction.	0.496
FAM229B	LRCOL1	ENSP00000357645	ENSP00000479730	Protein FAM229B; Family with sequence similarity 229 member B; Belongs to the FAM229 family.	Leucine-rich colipase-like protein 1; Leucine rich colipase like 1.	0.702
FAM229B	MAGEE2	ENSP00000357645	ENSP00000362457	Protein FAM229B; Family with sequence similarity 229 member B; Belongs to the FAM229 family.	Melanoma-associated antigen E2; MAGE family member E2.	0.543
FAM229B	NPIPB9	ENSP00000357645	ENSP00000446902	Protein FAM229B; Family with sequence similarity 229 member B; Belongs to the FAM229 family.	Nuclear pore complex interacting protein family member B9; Belongs to the NPIP family.	0.571
FAM229B	OR2AK2	ENSP00000357645	ENSP00000493202	Protein FAM229B; Family with sequence similarity 229 member B; Belongs to the FAM229 family.	Olfactory receptor 2AK2; Odorant receptor; Belongs to the G-protein coupled receptor 1 family.	0.522
FAM229B	SPATA24	ENSP00000357645	ENSP00000414920	Protein FAM229B; Family with sequence similarity 229 member B; Belongs to the FAM229 family.	Spermatogenesis-associated protein 24; Binds DNA with high affinity but does not bind to TATA boxes. Synergises with GMNN and TBP in activation of TATA box-containing promoters and with GMNN and TBPL1 in activation of the NF1 TATA-less promoter. May play a role in cytoplasm movement and removal during spermiogenesis (By similarity).	0.554
FAM229B	TMEM60	ENSP00000357645	ENSP00000257663	Protein FAM229B; Family with sequence similarity 229 member B; Belongs to the FAM229 family.	Transmembrane protein 60.	0.569
FSCB	C7orf31	ENSP00000344579	ENSP00000283905	Fibrous sheath CABYR-binding protein; May be involved in the later stages of fibrous sheath biogenesis and spermatozoa capacitation. Inhibits ROPN1 and ROPN1L SUMOylation. Binds calcium.	Uncharacterized protein C7orf31; Chromosome 7 open reading frame 31.	0.514