Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BYSL | DDX55 | ENSP00000230340 | ENSP00000238146 | Essential nuclear protein 1; Bystin; Required for processing of 20S pre-rRNA precursor and biogenesis of 40S ribosomal subunits. May be required for trophinin-dependent regulation of cell adhesion during implantation of human embryos; Belongs to the bystin family | ATP-dependent RNA helicase DDX55; Probable ATP-binding RNA helicase; DEAD-box helicases | 0.940 |
| BYSL | GRWD1 | ENSP00000230340 | ENSP00000253237 | Essential nuclear protein 1; Bystin; Required for processing of 20S pre-rRNA precursor and biogenesis of 40S ribosomal subunits. May be required for trophinin-dependent regulation of cell adhesion during implantation of human embryos; Belongs to the bystin family | Glutamate-rich WD repeat-containing protein 1; Histone binding-protein that regulates chromatin dynamics and minichromosome maintenance (MCM) loading at replication origins, possibly by promoting chromatin openness; WD repeat domain containing | 0.942 |
| BYSL | PNO1 | ENSP00000230340 | ENSP00000263657 | Essential nuclear protein 1; Bystin; Required for processing of 20S pre-rRNA precursor and biogenesis of 40S ribosomal subunits. May be required for trophinin-dependent regulation of cell adhesion during implantation of human embryos; Belongs to the bystin family | RNA-binding protein PNO1; Positively regulates dimethylation of two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 18S rRNA | 0.999 |
| BYSL | PWP1 | ENSP00000230340 | ENSP00000387365 | Essential nuclear protein 1; Bystin; Required for processing of 20S pre-rRNA precursor and biogenesis of 40S ribosomal subunits. May be required for trophinin-dependent regulation of cell adhesion during implantation of human embryos; Belongs to the bystin family | Periodic tryptophan protein 1 homolog; May play an important role in cell growth and/or transcription; Belongs to the WD repeat PWP1 family | 0.899 |
| BYSL | RIOK2 | ENSP00000230340 | ENSP00000283109 | Essential nuclear protein 1; Bystin; Required for processing of 20S pre-rRNA precursor and biogenesis of 40S ribosomal subunits. May be required for trophinin-dependent regulation of cell adhesion during implantation of human embryos; Belongs to the bystin family | Serine/threonine-protein kinase RIO2; Involved in the final steps of cytoplasmic maturation of the 40S ribosomal subunit. Involved in export of the 40S pre- ribosome particles (pre-40S) from the nucleus to the cytoplasm. Its catalytic activity is required for the release of NOB1, PNO1 and LTV1 from the late pre-40S and the processing of 18S-E pre- rRNA to the mature 18S rRNA | 0.999 |
| BYSL | RPF2 | ENSP00000230340 | ENSP00000402338 | Essential nuclear protein 1; Bystin; Required for processing of 20S pre-rRNA precursor and biogenesis of 40S ribosomal subunits. May be required for trophinin-dependent regulation of cell adhesion during implantation of human embryos; Belongs to the bystin family | Ribosome production factor 2 homolog; Involved in ribosomal large subunit assembly. May regulate the localization of the 5S RNP/5S ribonucleoprotein particle to the nucleolus | 0.927 |
| BYSL | RPS26 | ENSP00000230340 | ENSP00000348849 | Essential nuclear protein 1; Bystin; Required for processing of 20S pre-rRNA precursor and biogenesis of 40S ribosomal subunits. May be required for trophinin-dependent regulation of cell adhesion during implantation of human embryos; Belongs to the bystin family | Small subunit ribosomal protein s26e; Ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family | 0.959 |
| BYSL | RRS1 | ENSP00000230340 | ENSP00000322396 | Essential nuclear protein 1; Bystin; Required for processing of 20S pre-rRNA precursor and biogenesis of 40S ribosomal subunits. May be required for trophinin-dependent regulation of cell adhesion during implantation of human embryos; Belongs to the bystin family | Ribosome biogenesis regulatory protein homolog; Involved in ribosomal large subunit assembly. May regulate the localization of the 5S RNP/5S ribonucleoprotein particle to the nucleolus; Belongs to the RRS1 family | 0.938 |
| BYSL | TSR1 | ENSP00000230340 | ENSP00000301364 | Essential nuclear protein 1; Bystin; Required for processing of 20S pre-rRNA precursor and biogenesis of 40S ribosomal subunits. May be required for trophinin-dependent regulation of cell adhesion during implantation of human embryos; Belongs to the bystin family | Pre-rRNA-processing protein TSR1 homolog; Required during maturation of the 40S ribosomal subunit in the nucleolus | 0.999 |
| BYSL | TSR2 | ENSP00000230340 | ENSP00000364293 | Essential nuclear protein 1; Bystin; Required for processing of 20S pre-rRNA precursor and biogenesis of 40S ribosomal subunits. May be required for trophinin-dependent regulation of cell adhesion during implantation of human embryos; Belongs to the bystin family | Pre-rRNA-processing protein TSR2 homolog; May be involved in 20S pre-rRNA processing | 0.953 |
| DDX55 | BYSL | ENSP00000238146 | ENSP00000230340 | ATP-dependent RNA helicase DDX55; Probable ATP-binding RNA helicase; DEAD-box helicases | Essential nuclear protein 1; Bystin; Required for processing of 20S pre-rRNA precursor and biogenesis of 40S ribosomal subunits. May be required for trophinin-dependent regulation of cell adhesion during implantation of human embryos; Belongs to the bystin family | 0.940 |
| DDX55 | GRWD1 | ENSP00000238146 | ENSP00000253237 | ATP-dependent RNA helicase DDX55; Probable ATP-binding RNA helicase; DEAD-box helicases | Glutamate-rich WD repeat-containing protein 1; Histone binding-protein that regulates chromatin dynamics and minichromosome maintenance (MCM) loading at replication origins, possibly by promoting chromatin openness; WD repeat domain containing | 0.927 |
| DDX55 | PNO1 | ENSP00000238146 | ENSP00000263657 | ATP-dependent RNA helicase DDX55; Probable ATP-binding RNA helicase; DEAD-box helicases | RNA-binding protein PNO1; Positively regulates dimethylation of two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 18S rRNA | 0.935 |
| DDX55 | PWP1 | ENSP00000238146 | ENSP00000387365 | ATP-dependent RNA helicase DDX55; Probable ATP-binding RNA helicase; DEAD-box helicases | Periodic tryptophan protein 1 homolog; May play an important role in cell growth and/or transcription; Belongs to the WD repeat PWP1 family | 0.948 |
| DDX55 | RIOK2 | ENSP00000238146 | ENSP00000283109 | ATP-dependent RNA helicase DDX55; Probable ATP-binding RNA helicase; DEAD-box helicases | Serine/threonine-protein kinase RIO2; Involved in the final steps of cytoplasmic maturation of the 40S ribosomal subunit. Involved in export of the 40S pre- ribosome particles (pre-40S) from the nucleus to the cytoplasm. Its catalytic activity is required for the release of NOB1, PNO1 and LTV1 from the late pre-40S and the processing of 18S-E pre- rRNA to the mature 18S rRNA | 0.899 |
| DDX55 | RPF2 | ENSP00000238146 | ENSP00000402338 | ATP-dependent RNA helicase DDX55; Probable ATP-binding RNA helicase; DEAD-box helicases | Ribosome production factor 2 homolog; Involved in ribosomal large subunit assembly. May regulate the localization of the 5S RNP/5S ribonucleoprotein particle to the nucleolus | 0.991 |
| DDX55 | RRS1 | ENSP00000238146 | ENSP00000322396 | ATP-dependent RNA helicase DDX55; Probable ATP-binding RNA helicase; DEAD-box helicases | Ribosome biogenesis regulatory protein homolog; Involved in ribosomal large subunit assembly. May regulate the localization of the 5S RNP/5S ribonucleoprotein particle to the nucleolus; Belongs to the RRS1 family | 0.948 |
| DDX55 | TSR1 | ENSP00000238146 | ENSP00000301364 | ATP-dependent RNA helicase DDX55; Probable ATP-binding RNA helicase; DEAD-box helicases | Pre-rRNA-processing protein TSR1 homolog; Required during maturation of the 40S ribosomal subunit in the nucleolus | 0.928 |
| DDX55 | TSR2 | ENSP00000238146 | ENSP00000364293 | ATP-dependent RNA helicase DDX55; Probable ATP-binding RNA helicase; DEAD-box helicases | Pre-rRNA-processing protein TSR2 homolog; May be involved in 20S pre-rRNA processing | 0.922 |
| GRWD1 | BYSL | ENSP00000253237 | ENSP00000230340 | Glutamate-rich WD repeat-containing protein 1; Histone binding-protein that regulates chromatin dynamics and minichromosome maintenance (MCM) loading at replication origins, possibly by promoting chromatin openness; WD repeat domain containing | Essential nuclear protein 1; Bystin; Required for processing of 20S pre-rRNA precursor and biogenesis of 40S ribosomal subunits. May be required for trophinin-dependent regulation of cell adhesion during implantation of human embryos; Belongs to the bystin family | 0.942 |
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