STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHDC2Cilia- and flagella-associated protein 47; Calponin homology domain containing 2 (502 aa)    
Predicted Functional Partners:
CCDC108
Cilia- and flagella-associated protein 65; May play a role in sperm motility; Belongs to the CFAP65 family
   
  
 0.683
LANCL3
LanC-like protein 3; LanC like 3
      
 0.592
MAGEB16
Melanoma-associated antigen B16; MAGE family member B16
      
 0.586
FAM47B
Protein FAM47B; Family with sequence similarity 47 member B; Belongs to the FAM47 family
   
  
 0.565
ZNF630
Zinc finger protein 630; May be involved in transcriptional regulation; Zinc fingers C2H2-type
      
 0.557
CXorf22
Cilia- and flagella-associated protein 47; Chromosome X open reading frame 22
 
      0.556
TRAPPC11
Trafficking protein particle complex subunit 11; Involved in endoplasmic reticulum to Golgi apparatus trafficking at a very early stage; Trafficking protein particle complex
      
 0.556
CXorf30
Cilia- and flagella-associated protein 47; Chromosome X open reading frame 30
 
      0.539
FAM47A
Protein FAM47A; Family with sequence similarity 47 member A
   
  
 0.536
LRCH1
Leucine-rich repeat and calponin homology domain-containing protein 1; Acts as a negative regulator of GTPase CDC42 by sequestering CDC42-guanine exchange factor DOCK8. Probably by preventing CDC42 activation, negatively regulates CD4(+) T-cell migration
   
  
 0.536
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, human, man
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