STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C4orf47UPF0602 protein C4orf47; Chromosome 4 open reading frame 47; Belongs to the UPF0602 family. (309 aa)    
Predicted Functional Partners:
CCDC96
Coiled-coil domain containing 96.
   
  
 0.776
C7orf31
Uncharacterized protein C7orf31; Chromosome 7 open reading frame 31.
   
  
 0.694
C5orf49
Uncharacterized protein C5orf49; Chromosome 5 open reading frame 49.
   
  
 0.677
CFAP299
Cilia- and flagella-associated protein 299; May be involved in spermatogenesis.
   
  
 0.670
IQUB
IQ and ubiquitin-like domain-containing protein; May play roles in cilia formation and/or maintenance.
   
  
 0.642
EFCAB1
EF-hand calcium-binding domain-containing protein 1; EF-hand calcium binding domain 1.
   
 
 0.614
ARMC3
Armadillo repeat containing 3.
   
  
 0.603
C9orf116
UPF0691 protein C9orf116; Chromosome 9 open reading frame 116.
   
  
 0.600
CCDC38
Coiled-coil domain containing 38.
   
  
 0.581
CCDC116
Coiled-coil domain containing 116.
   
  
 0.580
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, human, man
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.