C22orf42 protein (human) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Homo sapiens

NCBI taxonomy Id: 9606
Other names: H. sapiens, human, man

Export your current network:

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file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

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same PNG format, but at higher resolution

... as a vector graphic:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C12orf56	C21orf62	ENSP00000446101	ENSP00000418653	Uncharacterized protein C12orf56; Chromosome 12 open reading frame 56.	Uncharacterized protein C21orf62; Chromosome 21 open reading frame 62.	0.440
C12orf56	C22orf42	ENSP00000446101	ENSP00000371529	Uncharacterized protein C12orf56; Chromosome 12 open reading frame 56.	Uncharacterized protein C22orf42; Chromosome 22 open reading frame 42.	0.470
C12orf56	C3orf22	ENSP00000446101	ENSP00000316644	Uncharacterized protein C12orf56; Chromosome 12 open reading frame 56.	Uncharacterized protein C3orf22; Chromosome 3 open reading frame 22.	0.570
C12orf56	SH2D7	ENSP00000446101	ENSP00000327846	Uncharacterized protein C12orf56; Chromosome 12 open reading frame 56.	SH2 domain containing 7.	0.500
C12orf56	SMIM17	ENSP00000446101	ENSP00000471126	Uncharacterized protein C12orf56; Chromosome 12 open reading frame 56.	Small integral membrane protein 17.	0.536
C12orf56	SPDYE4	ENSP00000446101	ENSP00000329522	Uncharacterized protein C12orf56; Chromosome 12 open reading frame 56.	Speedy protein E4; speedy/RINGO cell cycle regulator family member E4; Belongs to the Speedy/Ringo family.	0.497
C16orf78	C16orf86	ENSP00000299191	ENSP00000384117	Uncharacterized protein C16orf78; Chromosome 16 open reading frame 78.	Uncharacterized protein C16orf86; Chromosome 16 open reading frame 86.	0.466
C16orf78	C19orf18	ENSP00000299191	ENSP00000321519	Uncharacterized protein C16orf78; Chromosome 16 open reading frame 78.	Uncharacterized protein C19orf18; Chromosome 19 open reading frame 18.	0.444
C16orf78	C20orf144	ENSP00000299191	ENSP00000364370	Uncharacterized protein C16orf78; Chromosome 16 open reading frame 78.	Uncharacterized protein C20orf144; Chromosome 20 open reading frame 144.	0.515
C16orf78	C22orf42	ENSP00000299191	ENSP00000371529	Uncharacterized protein C16orf78; Chromosome 16 open reading frame 78.	Uncharacterized protein C22orf42; Chromosome 22 open reading frame 42.	0.446
C16orf86	C16orf78	ENSP00000384117	ENSP00000299191	Uncharacterized protein C16orf86; Chromosome 16 open reading frame 86.	Uncharacterized protein C16orf78; Chromosome 16 open reading frame 78.	0.466
C16orf86	C19orf18	ENSP00000384117	ENSP00000321519	Uncharacterized protein C16orf86; Chromosome 16 open reading frame 86.	Uncharacterized protein C19orf18; Chromosome 19 open reading frame 18.	0.467
C16orf86	C20orf144	ENSP00000384117	ENSP00000364370	Uncharacterized protein C16orf86; Chromosome 16 open reading frame 86.	Uncharacterized protein C20orf144; Chromosome 20 open reading frame 144.	0.531
C16orf86	C22orf42	ENSP00000384117	ENSP00000371529	Uncharacterized protein C16orf86; Chromosome 16 open reading frame 86.	Uncharacterized protein C22orf42; Chromosome 22 open reading frame 42.	0.441
C19orf18	C16orf78	ENSP00000321519	ENSP00000299191	Uncharacterized protein C19orf18; Chromosome 19 open reading frame 18.	Uncharacterized protein C16orf78; Chromosome 16 open reading frame 78.	0.444
C19orf18	C16orf86	ENSP00000321519	ENSP00000384117	Uncharacterized protein C19orf18; Chromosome 19 open reading frame 18.	Uncharacterized protein C16orf86; Chromosome 16 open reading frame 86.	0.467
C19orf18	C20orf144	ENSP00000321519	ENSP00000364370	Uncharacterized protein C19orf18; Chromosome 19 open reading frame 18.	Uncharacterized protein C20orf144; Chromosome 20 open reading frame 144.	0.510
C19orf18	C22orf42	ENSP00000321519	ENSP00000371529	Uncharacterized protein C19orf18; Chromosome 19 open reading frame 18.	Uncharacterized protein C22orf42; Chromosome 22 open reading frame 42.	0.435
C20orf144	C16orf78	ENSP00000364370	ENSP00000299191	Uncharacterized protein C20orf144; Chromosome 20 open reading frame 144.	Uncharacterized protein C16orf78; Chromosome 16 open reading frame 78.	0.515
C20orf144	C16orf86	ENSP00000364370	ENSP00000384117	Uncharacterized protein C20orf144; Chromosome 20 open reading frame 144.	Uncharacterized protein C16orf86; Chromosome 16 open reading frame 86.	0.531