SMIM8 protein (human) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Homo sapiens

NCBI taxonomy Id: 9606
Other names: H. sapiens, human, man

Export your current network:

... as a bitmap image:

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file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

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same PNG format, but at higher resolution

... as a vector graphic:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C6orf163	CFAP206	ENSP00000373575	ENSP00000358575	Uncharacterized protein C6orf163; Chromosome 6 open reading frame 163.	Cilia- and flagella-associated protein 206; May regulate cilium motility through its role in the assembly of the axonemal radial spokes.	0.487
C6orf163	SMIM8	ENSP00000373575	ENSP00000376603	Uncharacterized protein C6orf163; Chromosome 6 open reading frame 163.	Small integral membrane protein 8.	0.617
CBY2	RASEF	ENSP00000309189	ENSP00000365630	Chibby family member 2.	Ras and EF-hand domain-containing protein; Binds predominantly GDP, and also GTP.	0.426
CBY2	SLC25A2	ENSP00000309189	ENSP00000239451	Chibby family member 2.	Mitochondrial ornithine transporter 2; Ornithine transport across inner mitochondrial membrane, from the cytoplasm to the matrix; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.449
CBY2	SLC25A41	ENSP00000309189	ENSP00000322649	Chibby family member 2.	Solute carrier family 25 member 41.	0.598
CBY2	SMIM8	ENSP00000309189	ENSP00000376603	Chibby family member 2.	Small integral membrane protein 8.	0.607
CBY2	SMIM9	ENSP00000309189	ENSP00000358542	Chibby family member 2.	Small integral membrane protein 9.	0.588
CBY2	TMEM210	ENSP00000309189	ENSP00000456333	Chibby family member 2.	Transmembrane protein 210.	0.607
CBY2	TOMM20L	ENSP00000309189	ENSP00000354204	Chibby family member 2.	TOMM20-like protein 1; Translocase of outer mitochondrial membrane 20 like.	0.504
CFAP206	C6orf163	ENSP00000358575	ENSP00000373575	Cilia- and flagella-associated protein 206; May regulate cilium motility through its role in the assembly of the axonemal radial spokes.	Uncharacterized protein C6orf163; Chromosome 6 open reading frame 163.	0.487
CFAP206	SMIM8	ENSP00000358575	ENSP00000376603	Cilia- and flagella-associated protein 206; May regulate cilium motility through its role in the assembly of the axonemal radial spokes.	Small integral membrane protein 8.	0.523
RASEF	CBY2	ENSP00000365630	ENSP00000309189	Ras and EF-hand domain-containing protein; Binds predominantly GDP, and also GTP.	Chibby family member 2.	0.426
RASEF	SLC25A2	ENSP00000365630	ENSP00000239451	Ras and EF-hand domain-containing protein; Binds predominantly GDP, and also GTP.	Mitochondrial ornithine transporter 2; Ornithine transport across inner mitochondrial membrane, from the cytoplasm to the matrix; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.402
RASEF	SLC25A41	ENSP00000365630	ENSP00000322649	Ras and EF-hand domain-containing protein; Binds predominantly GDP, and also GTP.	Solute carrier family 25 member 41.	0.567
RASEF	SMIM8	ENSP00000365630	ENSP00000376603	Ras and EF-hand domain-containing protein; Binds predominantly GDP, and also GTP.	Small integral membrane protein 8.	0.594
RASEF	SMIM9	ENSP00000365630	ENSP00000358542	Ras and EF-hand domain-containing protein; Binds predominantly GDP, and also GTP.	Small integral membrane protein 9.	0.606
RASEF	TMEM210	ENSP00000365630	ENSP00000456333	Ras and EF-hand domain-containing protein; Binds predominantly GDP, and also GTP.	Transmembrane protein 210.	0.559
RASEF	TOMM20L	ENSP00000365630	ENSP00000354204	Ras and EF-hand domain-containing protein; Binds predominantly GDP, and also GTP.	TOMM20-like protein 1; Translocase of outer mitochondrial membrane 20 like.	0.505
SLC25A2	CBY2	ENSP00000239451	ENSP00000309189	Mitochondrial ornithine transporter 2; Ornithine transport across inner mitochondrial membrane, from the cytoplasm to the matrix; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Chibby family member 2.	0.449
SLC25A2	RASEF	ENSP00000239451	ENSP00000365630	Mitochondrial ornithine transporter 2; Ornithine transport across inner mitochondrial membrane, from the cytoplasm to the matrix; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Ras and EF-hand domain-containing protein; Binds predominantly GDP, and also GTP.	0.402