Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BICDL2 | FLYWCH2 | ENSP00000459043 | ENSP00000380159 | BICD family like cargo adaptor 2. | FLYWCH family member 2. | 0.486 |
BICDL2 | HCFC1R1 | ENSP00000459043 | ENSP00000248089 | BICD family like cargo adaptor 2. | Host cell factor C1 regulator 1; Regulates HCFC1 activity by modulating its subcellular localization. Overexpression of HCFC1R1 leads to accumulation of HCFC1 in the cytoplasm. HCFC1R1-mediated export may provide the pool of cytoplasmic HCFC1 required for import of virion-derived VP16 into the nucleus. | 0.455 |
BICDL2 | TMEM235 | ENSP00000459043 | ENSP00000402790 | BICD family like cargo adaptor 2. | Transmembrane protein 235; Belongs to the PMP-22/EMP/MP20 family. | 0.432 |
FAM86C1 | FLYWCH2 | ENSP00000352182 | ENSP00000380159 | Protein FAM86C1. | FLYWCH family member 2. | 0.448 |
FAM86C1 | ZNF720 | ENSP00000352182 | ENSP00000319222 | Protein FAM86C1. | Putative protein ZNF720; Zinc finger protein 720. | 0.479 |
FLYWCH2 | BICDL2 | ENSP00000380159 | ENSP00000459043 | FLYWCH family member 2. | BICD family like cargo adaptor 2. | 0.486 |
FLYWCH2 | FAM86C1 | ENSP00000380159 | ENSP00000352182 | FLYWCH family member 2. | Protein FAM86C1. | 0.448 |
FLYWCH2 | HCFC1R1 | ENSP00000380159 | ENSP00000248089 | FLYWCH family member 2. | Host cell factor C1 regulator 1; Regulates HCFC1 activity by modulating its subcellular localization. Overexpression of HCFC1R1 leads to accumulation of HCFC1 in the cytoplasm. HCFC1R1-mediated export may provide the pool of cytoplasmic HCFC1 required for import of virion-derived VP16 into the nucleus. | 0.517 |
FLYWCH2 | HSPA8 | ENSP00000380159 | ENSP00000437125 | FLYWCH family member 2. | Heat shock cognate 71 kDa protein; Molecular chaperone implicated in a wide variety of cellular processes, including protection of the proteome from stress, folding and transport of newly synthesized polypeptides, activation of proteolysis of misfolded proteins and the formation and dissociation of protein complexes. Plays a pivotal role in the protein quality control system, ensuring the correct folding of proteins, the re-folding of misfolded proteins and controlling the targeting of proteins for subsequent degradation. This is achieved through cycles of ATP binding, ATP hydrolysis a [...] | 0.612 |
FLYWCH2 | RXRB | ENSP00000380159 | ENSP00000363817 | FLYWCH family member 2. | Retinoic acid receptor RXR-beta; Receptor for retinoic acid. Retinoic acid receptors bind as heterodimers to their target response elements in response to their ligands, all-trans or 9-cis retinoic acid, and regulate gene expression in various biological processes. The RAR/RXR heterodimers bind to the retinoic acid response elements (RARE); Belongs to the nuclear hormone receptor family. NR2 subfamily. | 0.506 |
FLYWCH2 | TBC1D23 | ENSP00000380159 | ENSP00000377700 | FLYWCH family member 2. | TBC1 domain family member 23; Putative Rab GTPase-activating protein which plays a role in vesicular trafficking. Involved in endosome-to-Golgi trafficking. Acts as a bridging protein by binding simultaneously to golgins, including GOLGA1 and GOLGA4, located at the trans-Golgi, and to the WASH complex, located on endosome-derived vesicles. Together with WDR11 complex facilitates the golgin-mediated capture of vesicles generated using AP- 1. Plays a role in brain development, including in cortical neuron positioning (By similarity). May also be important for neurite outgrowth, possibly [...] | 0.605 |
FLYWCH2 | THEM6 | ENSP00000380159 | ENSP00000338607 | FLYWCH family member 2. | Protein THEM6; Thioesterase superfamily member 6. | 0.508 |
FLYWCH2 | THOC6 | ENSP00000380159 | ENSP00000326531 | FLYWCH family member 2. | THO complex subunit 6 homolog; Acts as component of the THO subcomplex of the TREX complex which is thought to couple mRNA transcription, processing and nuclear export, and which specifically associates with spliced mRNA and not with unspliced pre-mRNA. TREX is recruited to spliced mRNAs by a transcription-independent mechanism, binds to mRNA upstream of the exon-junction complex (EJC) and is recruited in a splicing- and cap- dependent manner to a region near the 5' end of the mRNA where it functions in mRNA export to the cytoplasm via the TAP/NFX1 pathway. The TREX complex is essentia [...] | 0.445 |
FLYWCH2 | TMEM235 | ENSP00000380159 | ENSP00000402790 | FLYWCH family member 2. | Transmembrane protein 235; Belongs to the PMP-22/EMP/MP20 family. | 0.447 |
FLYWCH2 | ZNF720 | ENSP00000380159 | ENSP00000319222 | FLYWCH family member 2. | Putative protein ZNF720; Zinc finger protein 720. | 0.473 |
HCFC1R1 | BICDL2 | ENSP00000248089 | ENSP00000459043 | Host cell factor C1 regulator 1; Regulates HCFC1 activity by modulating its subcellular localization. Overexpression of HCFC1R1 leads to accumulation of HCFC1 in the cytoplasm. HCFC1R1-mediated export may provide the pool of cytoplasmic HCFC1 required for import of virion-derived VP16 into the nucleus. | BICD family like cargo adaptor 2. | 0.455 |
HCFC1R1 | FLYWCH2 | ENSP00000248089 | ENSP00000380159 | Host cell factor C1 regulator 1; Regulates HCFC1 activity by modulating its subcellular localization. Overexpression of HCFC1R1 leads to accumulation of HCFC1 in the cytoplasm. HCFC1R1-mediated export may provide the pool of cytoplasmic HCFC1 required for import of virion-derived VP16 into the nucleus. | FLYWCH family member 2. | 0.517 |
HCFC1R1 | THOC6 | ENSP00000248089 | ENSP00000326531 | Host cell factor C1 regulator 1; Regulates HCFC1 activity by modulating its subcellular localization. Overexpression of HCFC1R1 leads to accumulation of HCFC1 in the cytoplasm. HCFC1R1-mediated export may provide the pool of cytoplasmic HCFC1 required for import of virion-derived VP16 into the nucleus. | THO complex subunit 6 homolog; Acts as component of the THO subcomplex of the TREX complex which is thought to couple mRNA transcription, processing and nuclear export, and which specifically associates with spliced mRNA and not with unspliced pre-mRNA. TREX is recruited to spliced mRNAs by a transcription-independent mechanism, binds to mRNA upstream of the exon-junction complex (EJC) and is recruited in a splicing- and cap- dependent manner to a region near the 5' end of the mRNA where it functions in mRNA export to the cytoplasm via the TAP/NFX1 pathway. The TREX complex is essentia [...] | 0.534 |
HCFC1R1 | TMEM235 | ENSP00000248089 | ENSP00000402790 | Host cell factor C1 regulator 1; Regulates HCFC1 activity by modulating its subcellular localization. Overexpression of HCFC1R1 leads to accumulation of HCFC1 in the cytoplasm. HCFC1R1-mediated export may provide the pool of cytoplasmic HCFC1 required for import of virion-derived VP16 into the nucleus. | Transmembrane protein 235; Belongs to the PMP-22/EMP/MP20 family. | 0.418 |
HSPA8 | FLYWCH2 | ENSP00000437125 | ENSP00000380159 | Heat shock cognate 71 kDa protein; Molecular chaperone implicated in a wide variety of cellular processes, including protection of the proteome from stress, folding and transport of newly synthesized polypeptides, activation of proteolysis of misfolded proteins and the formation and dissociation of protein complexes. Plays a pivotal role in the protein quality control system, ensuring the correct folding of proteins, the re-folding of misfolded proteins and controlling the targeting of proteins for subsequent degradation. This is achieved through cycles of ATP binding, ATP hydrolysis a [...] | FLYWCH family member 2. | 0.612 |
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