SLC66A2 protein (human) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Homo sapiens

NCBI taxonomy Id: 9606
Other names: H. sapiens, human, man

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATP9A	DOP1A	ENSP00000342481	ENSP00000237163	Probable phospholipid-transporting ATPase IIA; ATPase phospholipid transporting 9A.	Protein dopey-1; May be involved in protein traffic between late Golgi and early endosomes; Belongs to the dopey family.	0.537
ATP9A	DOP1B	ENSP00000342481	ENSP00000382104	Probable phospholipid-transporting ATPase IIA; ATPase phospholipid transporting 9A.	Protein dopey-2; May be involved in protein traffic between late Golgi and early endosomes.	0.498
ATP9A	SLC66A2	ENSP00000342481	ENSP00000380880	Probable phospholipid-transporting ATPase IIA; ATPase phospholipid transporting 9A.	Solute carrier family 66 member 2.	0.586
ATP9B	DOP1A	ENSP00000398076	ENSP00000237163	Probable phospholipid-transporting ATPase IIB; ATPase phospholipid transporting 9B.	Protein dopey-1; May be involved in protein traffic between late Golgi and early endosomes; Belongs to the dopey family.	0.558
ATP9B	DOP1B	ENSP00000398076	ENSP00000382104	Probable phospholipid-transporting ATPase IIB; ATPase phospholipid transporting 9B.	Protein dopey-2; May be involved in protein traffic between late Golgi and early endosomes.	0.482
ATP9B	SLC66A2	ENSP00000398076	ENSP00000380880	Probable phospholipid-transporting ATPase IIB; ATPase phospholipid transporting 9B.	Solute carrier family 66 member 2.	0.746
ATP9B	ZNF407	ENSP00000398076	ENSP00000299687	Probable phospholipid-transporting ATPase IIB; ATPase phospholipid transporting 9B.	Zinc finger protein 407; May be involved in transcriptional regulation.	0.423
CCDC103	SLC66A2	ENSP00000391692	ENSP00000380880	Coiled-coil domain-containing protein 103; Dynein-attachment factor required for cilia motility. Belongs to the CCDC103/PR46b family.	Solute carrier family 66 member 2.	0.586
DOP1A	ATP9A	ENSP00000237163	ENSP00000342481	Protein dopey-1; May be involved in protein traffic between late Golgi and early endosomes; Belongs to the dopey family.	Probable phospholipid-transporting ATPase IIA; ATPase phospholipid transporting 9A.	0.537
DOP1A	ATP9B	ENSP00000237163	ENSP00000398076	Protein dopey-1; May be involved in protein traffic between late Golgi and early endosomes; Belongs to the dopey family.	Probable phospholipid-transporting ATPase IIB; ATPase phospholipid transporting 9B.	0.558
DOP1A	SLC66A2	ENSP00000237163	ENSP00000380880	Protein dopey-1; May be involved in protein traffic between late Golgi and early endosomes; Belongs to the dopey family.	Solute carrier family 66 member 2.	0.686
DOP1B	ATP9A	ENSP00000382104	ENSP00000342481	Protein dopey-2; May be involved in protein traffic between late Golgi and early endosomes.	Probable phospholipid-transporting ATPase IIA; ATPase phospholipid transporting 9A.	0.498
DOP1B	ATP9B	ENSP00000382104	ENSP00000398076	Protein dopey-2; May be involved in protein traffic between late Golgi and early endosomes.	Probable phospholipid-transporting ATPase IIB; ATPase phospholipid transporting 9B.	0.482
DOP1B	SLC66A2	ENSP00000382104	ENSP00000380880	Protein dopey-2; May be involved in protein traffic between late Golgi and early endosomes.	Solute carrier family 66 member 2.	0.686
MPDU1	SLC66A2	ENSP00000250124	ENSP00000380880	Mannose-P-dolichol utilization defect 1 protein; Required for normal utilization of mannose-dolichol phosphate (Dol-P-Man) in the synthesis of N-linked and O-linked oligosaccharides and GPI anchors; Belongs to the MPDU1 (TC 2.A.43.3) family.	Solute carrier family 66 member 2.	0.564
RBFA	SLC66A2	ENSP00000305696	ENSP00000380880	Putative ribosome-binding factor A, mitochondrial; Ribosome binding factor A.	Solute carrier family 66 member 2.	0.632
RBFA	TXNL4A	ENSP00000305696	ENSP00000269601	Putative ribosome-binding factor A, mitochondrial; Ribosome binding factor A.	Thioredoxin-like protein 4A; Plays role in pre-mRNA splicing as component of the U5 snRNP and U4/U6-U5 tri-snRNP complexes that are involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex); Belongs to the DIM1 family.	0.585
RBFA	ZNF407	ENSP00000305696	ENSP00000299687	Putative ribosome-binding factor A, mitochondrial; Ribosome binding factor A.	Zinc finger protein 407; May be involved in transcriptional regulation.	0.485
SLC25A46	SLC66A2	ENSP00000348211	ENSP00000380880	Solute carrier family 25 member 46; May play a role in mitochondrial dynamics by controlling mitochondrial membrane fission; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Solute carrier family 66 member 2.	0.813
SLC66A2	ATP9A	ENSP00000380880	ENSP00000342481	Solute carrier family 66 member 2.	Probable phospholipid-transporting ATPase IIA; ATPase phospholipid transporting 9A.	0.586