Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C21orf58 | SMIM11A | ENSP00000291691 | ENSP00000498771 | Uncharacterized protein C21orf58; Chromosome 21 open reading frame 58. | Small integral membrane protein 11A. | 0.405 |
PAXBP1 | SMIM11A | ENSP00000328992 | ENSP00000498771 | PAX3- and PAX7-binding protein 1; Adapter protein linking the transcription factors PAX3 and PAX7 to the histone methylation machinery and involved in myogenesis. Associates with a histone methyltransferase complex that specifically mediates dimethylation and trimethylation of 'Lys-4' of histone H3. Mediates the recruitment of that complex to the transcription factors PAX3 and PAX7 on chromatin to regulate the expression of genes involved in muscle progenitor cells proliferation including ID3 and CDC20 (By similarity); Belongs to the GCF family. | Small integral membrane protein 11A. | 0.503 |
PAXBP1 | TMEM50B | ENSP00000328992 | ENSP00000439768 | PAX3- and PAX7-binding protein 1; Adapter protein linking the transcription factors PAX3 and PAX7 to the histone methylation machinery and involved in myogenesis. Associates with a histone methyltransferase complex that specifically mediates dimethylation and trimethylation of 'Lys-4' of histone H3. Mediates the recruitment of that complex to the transcription factors PAX3 and PAX7 on chromatin to regulate the expression of genes involved in muscle progenitor cells proliferation including ID3 and CDC20 (By similarity); Belongs to the GCF family. | Transmembrane protein 50B; Belongs to the UPF0220 family. | 0.502 |
RGPD1 | SMIM11A | ENSP00000453170 | ENSP00000498771 | RANBP2 like and GRIP domain containing 1. | Small integral membrane protein 11A. | 0.404 |
RUNX1 | SMIM11A | ENSP00000300305 | ENSP00000498771 | Runt-related transcription factor 1; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. The heterodimers bind to the core site of a number of enhancers and promoters, including murine leukemia virus, polyomavirus enhancer, T [...] | Small integral membrane protein 11A. | 0.428 |
SMIM11A | C21orf58 | ENSP00000498771 | ENSP00000291691 | Small integral membrane protein 11A. | Uncharacterized protein C21orf58; Chromosome 21 open reading frame 58. | 0.405 |
SMIM11A | PAXBP1 | ENSP00000498771 | ENSP00000328992 | Small integral membrane protein 11A. | PAX3- and PAX7-binding protein 1; Adapter protein linking the transcription factors PAX3 and PAX7 to the histone methylation machinery and involved in myogenesis. Associates with a histone methyltransferase complex that specifically mediates dimethylation and trimethylation of 'Lys-4' of histone H3. Mediates the recruitment of that complex to the transcription factors PAX3 and PAX7 on chromatin to regulate the expression of genes involved in muscle progenitor cells proliferation including ID3 and CDC20 (By similarity); Belongs to the GCF family. | 0.503 |
SMIM11A | RGPD1 | ENSP00000498771 | ENSP00000453170 | Small integral membrane protein 11A. | RANBP2 like and GRIP domain containing 1. | 0.404 |
SMIM11A | RUNX1 | ENSP00000498771 | ENSP00000300305 | Small integral membrane protein 11A. | Runt-related transcription factor 1; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. The heterodimers bind to the core site of a number of enhancers and promoters, including murine leukemia virus, polyomavirus enhancer, T [...] | 0.428 |
SMIM11A | TMEM50B | ENSP00000498771 | ENSP00000439768 | Small integral membrane protein 11A. | Transmembrane protein 50B; Belongs to the UPF0220 family. | 0.413 |
TMEM50B | PAXBP1 | ENSP00000439768 | ENSP00000328992 | Transmembrane protein 50B; Belongs to the UPF0220 family. | PAX3- and PAX7-binding protein 1; Adapter protein linking the transcription factors PAX3 and PAX7 to the histone methylation machinery and involved in myogenesis. Associates with a histone methyltransferase complex that specifically mediates dimethylation and trimethylation of 'Lys-4' of histone H3. Mediates the recruitment of that complex to the transcription factors PAX3 and PAX7 on chromatin to regulate the expression of genes involved in muscle progenitor cells proliferation including ID3 and CDC20 (By similarity); Belongs to the GCF family. | 0.502 |
TMEM50B | SMIM11A | ENSP00000439768 | ENSP00000498771 | Transmembrane protein 50B; Belongs to the UPF0220 family. | Small integral membrane protein 11A. | 0.413 |