Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAL3ST4 | SMIM2 | ENSP00000353142 | ENSP00000383270 | Galactose-3-O-sulfotransferase 4; Catalyzes the transfer of sulfate to beta-1,3-linked galactose residues in O-linked glycoproteins. Good substrates include asialofetuin, Gal-beta-1,3-GalNAc and Gal-beta-1,3 (GlcNAc-beta- 1,6)GalNAc. | Small integral membrane protein 2. | 0.400 |
SMIM1 | SMIM2 | ENSP00000457386 | ENSP00000383270 | Small integral membrane protein 1; Regulator of red blood cell formation. Belongs to the SMIM1 family. | Small integral membrane protein 2. | 0.446 |
SMIM1 | SMIM3 | ENSP00000457386 | ENSP00000436897 | Small integral membrane protein 1; Regulator of red blood cell formation. Belongs to the SMIM1 family. | Small integral membrane protein 3. | 0.530 |
SMIM2 | GAL3ST4 | ENSP00000383270 | ENSP00000353142 | Small integral membrane protein 2. | Galactose-3-O-sulfotransferase 4; Catalyzes the transfer of sulfate to beta-1,3-linked galactose residues in O-linked glycoproteins. Good substrates include asialofetuin, Gal-beta-1,3-GalNAc and Gal-beta-1,3 (GlcNAc-beta- 1,6)GalNAc. | 0.400 |
SMIM2 | SMIM1 | ENSP00000383270 | ENSP00000457386 | Small integral membrane protein 2. | Small integral membrane protein 1; Regulator of red blood cell formation. Belongs to the SMIM1 family. | 0.446 |
SMIM2 | SMIM3 | ENSP00000383270 | ENSP00000436897 | Small integral membrane protein 2. | Small integral membrane protein 3. | 0.418 |
SMIM3 | SMIM1 | ENSP00000436897 | ENSP00000457386 | Small integral membrane protein 3. | Small integral membrane protein 1; Regulator of red blood cell formation. Belongs to the SMIM1 family. | 0.530 |
SMIM3 | SMIM2 | ENSP00000436897 | ENSP00000383270 | Small integral membrane protein 3. | Small integral membrane protein 2. | 0.418 |