TMEM213 protein (human) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TMEM213

Transmembrane protein 213. (107 aa)

Predicted Functional Partners:

CDC20B

0.764

LRRC74B

0.742

ATP6V0A4

0.650

TMEM207

0.604

TMEM116

0.595

TMEM61

0.543

TMEM25

0.542

RTP3

0.528

KIF6

0.501

PLEKHG7

0.484

Your Current Organism:

Homo sapiens

NCBI taxonomy Id: 9606
Other names: H. sapiens, human, man

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATP6V0A4	TMEM213	ENSP00000308122	ENSP00000390407	V-type proton ATPase 116 kDa subunit a isoform 4; Part of the proton channel of the V-ATPase that is involved in normal vectorial acid transport into the urine by the kidney.	Transmembrane protein 213.	0.650
CDC20B	KIF6	ENSP00000370781	ENSP00000287152	Cell division cycle 20B; Belongs to the WD repeat CDC20/Fizzy family.	Kinesin-like protein KIF6; Kinesin family member 6.	0.593
CDC20B	LRRC74B	ENSP00000370781	ENSP00000394078	Cell division cycle 20B; Belongs to the WD repeat CDC20/Fizzy family.	Leucine-rich repeat-containing protein 74B; Leucine rich repeat containing 74B.	0.783
CDC20B	TMEM213	ENSP00000370781	ENSP00000390407	Cell division cycle 20B; Belongs to the WD repeat CDC20/Fizzy family.	Transmembrane protein 213.	0.764
KIF6	CDC20B	ENSP00000287152	ENSP00000370781	Kinesin-like protein KIF6; Kinesin family member 6.	Cell division cycle 20B; Belongs to the WD repeat CDC20/Fizzy family.	0.593
KIF6	LRRC74B	ENSP00000287152	ENSP00000394078	Kinesin-like protein KIF6; Kinesin family member 6.	Leucine-rich repeat-containing protein 74B; Leucine rich repeat containing 74B.	0.457
KIF6	TMEM213	ENSP00000287152	ENSP00000390407	Kinesin-like protein KIF6; Kinesin family member 6.	Transmembrane protein 213.	0.501
LRRC74B	CDC20B	ENSP00000394078	ENSP00000370781	Leucine-rich repeat-containing protein 74B; Leucine rich repeat containing 74B.	Cell division cycle 20B; Belongs to the WD repeat CDC20/Fizzy family.	0.783
LRRC74B	KIF6	ENSP00000394078	ENSP00000287152	Leucine-rich repeat-containing protein 74B; Leucine rich repeat containing 74B.	Kinesin-like protein KIF6; Kinesin family member 6.	0.457
LRRC74B	TMEM213	ENSP00000394078	ENSP00000390407	Leucine-rich repeat-containing protein 74B; Leucine rich repeat containing 74B.	Transmembrane protein 213.	0.742
PLEKHG7	TMEM213	ENSP00000492692	ENSP00000390407	Pleckstrin homology and RhoGEF domain containing G7.	Transmembrane protein 213.	0.484
RTP3	TMEM116	ENSP00000296142	ENSP00000447731	Receptor-transporting protein 3; Promotes functional cell surface expression of the bitter taste receptors TAS2R16 and TAS2R43; Belongs to the TMEM7 family.	Transmembrane protein 116.	0.513
RTP3	TMEM207	ENSP00000296142	ENSP00000346981	Receptor-transporting protein 3; Promotes functional cell surface expression of the bitter taste receptors TAS2R16 and TAS2R43; Belongs to the TMEM7 family.	Transmembrane protein 207.	0.479
RTP3	TMEM213	ENSP00000296142	ENSP00000390407	Receptor-transporting protein 3; Promotes functional cell surface expression of the bitter taste receptors TAS2R16 and TAS2R43; Belongs to the TMEM7 family.	Transmembrane protein 213.	0.528
RTP3	TMEM25	ENSP00000296142	ENSP00000431548	Receptor-transporting protein 3; Promotes functional cell surface expression of the bitter taste receptors TAS2R16 and TAS2R43; Belongs to the TMEM7 family.	Transmembrane protein 25; In neurons, modulates the degradation of NMDA receptor GRIN2B subunit. Plays a role in the regulation of neuronal excitability.	0.571
RTP3	TMEM61	ENSP00000296142	ENSP00000360315	Receptor-transporting protein 3; Promotes functional cell surface expression of the bitter taste receptors TAS2R16 and TAS2R43; Belongs to the TMEM7 family.	Transmembrane protein 61.	0.440
TMEM116	RTP3	ENSP00000447731	ENSP00000296142	Transmembrane protein 116.	Receptor-transporting protein 3; Promotes functional cell surface expression of the bitter taste receptors TAS2R16 and TAS2R43; Belongs to the TMEM7 family.	0.513
TMEM116	TMEM207	ENSP00000447731	ENSP00000346981	Transmembrane protein 116.	Transmembrane protein 207.	0.575
TMEM116	TMEM213	ENSP00000447731	ENSP00000390407	Transmembrane protein 116.	Transmembrane protein 213.	0.595
TMEM116	TMEM25	ENSP00000447731	ENSP00000431548	Transmembrane protein 116.	Transmembrane protein 25; In neurons, modulates the degradation of NMDA receptor GRIN2B subunit. Plays a role in the regulation of neuronal excitability.	0.546