PRR29 protein (human) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Homo sapiens

NCBI taxonomy Id: 9606
Other names: H. sapiens, human, man

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same PNG format, but at higher resolution

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CEP95	FTSJ3	ENSP00000450461	ENSP00000396673	Centrosomal protein 95.	pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3; RNA 2'-O-methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation.	0.439
CEP95	PRR29	ENSP00000450461	ENSP00000396936	Centrosomal protein 95.	Proline-rich protein 29; Proline rich 29.	0.613
FTSJ3	CEP95	ENSP00000396673	ENSP00000450461	pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3; RNA 2'-O-methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation.	Centrosomal protein 95.	0.439
FTSJ3	PRR29	ENSP00000396673	ENSP00000396936	pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3; RNA 2'-O-methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation.	Proline-rich protein 29; Proline rich 29.	0.459
HAGHL	PRR29	ENSP00000374353	ENSP00000396936	Hydroxyacylglutathione hydrolase-like protein; Hydrolase acting on ester bonds.	Proline-rich protein 29; Proline rich 29.	0.403
LRRC20	PRR29	ENSP00000348043	ENSP00000396936	Leucine-rich repeat-containing protein 20; Leucine rich repeat containing 20.	Proline-rich protein 29; Proline rich 29.	0.441
POPDC2	PRR29	ENSP00000264231	ENSP00000396936	Popeye domain-containing protein 2; Important for the maintenance of cardiac function. Plays a regulatory function in heart rate dynamics mediated, at least in part, through cAMP-binding and, probably, by increasing cell surface expression of the potassium channel KCNK2 and enhancing current density; Belongs to the popeye family.	Proline-rich protein 29; Proline rich 29.	0.551
PRR29	CEP95	ENSP00000396936	ENSP00000450461	Proline-rich protein 29; Proline rich 29.	Centrosomal protein 95.	0.613
PRR29	FTSJ3	ENSP00000396936	ENSP00000396673	Proline-rich protein 29; Proline rich 29.	pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3; RNA 2'-O-methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation.	0.459
PRR29	HAGHL	ENSP00000396936	ENSP00000374353	Proline-rich protein 29; Proline rich 29.	Hydroxyacylglutathione hydrolase-like protein; Hydrolase acting on ester bonds.	0.403
PRR29	LRRC20	ENSP00000396936	ENSP00000348043	Proline-rich protein 29; Proline rich 29.	Leucine-rich repeat-containing protein 20; Leucine rich repeat containing 20.	0.441
PRR29	POPDC2	ENSP00000396936	ENSP00000264231	Proline-rich protein 29; Proline rich 29.	Popeye domain-containing protein 2; Important for the maintenance of cardiac function. Plays a regulatory function in heart rate dynamics mediated, at least in part, through cAMP-binding and, probably, by increasing cell surface expression of the potassium channel KCNK2 and enhancing current density; Belongs to the popeye family.	0.551