Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FAU | GAGE12F | ENSP00000431822 | ENSP00000491865 | Ubiquitin-like protein FUBI; FAU ubiquitin like and ribosomal protein S30 fusion. | G antigen 12F. | 0.991 |
FAU | GAGE12G | ENSP00000431822 | ENSP00000416249 | Ubiquitin-like protein FUBI; FAU ubiquitin like and ribosomal protein S30 fusion. | G antigen 12G. | 0.991 |
FAU | GAGE13 | ENSP00000431822 | ENSP00000483811 | Ubiquitin-like protein FUBI; FAU ubiquitin like and ribosomal protein S30 fusion. | G antigen 13. | 0.991 |
FAU | GAGE2A | ENSP00000431822 | ENSP00000355421 | Ubiquitin-like protein FUBI; FAU ubiquitin like and ribosomal protein S30 fusion. | G antigen 2A. | 0.991 |
FAU | RPL11 | ENSP00000431822 | ENSP00000496250 | Ubiquitin-like protein FUBI; FAU ubiquitin like and ribosomal protein S30 fusion. | 60S ribosomal protein L11; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through [...] | 0.999 |
FAU | RPL19 | ENSP00000431822 | ENSP00000225430 | Ubiquitin-like protein FUBI; FAU ubiquitin like and ribosomal protein S30 fusion. | Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. | 0.999 |
FAU | RPL5 | ENSP00000431822 | ENSP00000359345 | Ubiquitin-like protein FUBI; FAU ubiquitin like and ribosomal protein S30 fusion. | 60S ribosomal protein L5; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through [...] | 0.999 |
FAU | RPS11 | ENSP00000431822 | ENSP00000270625 | Ubiquitin-like protein FUBI; FAU ubiquitin like and ribosomal protein S30 fusion. | Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. | 0.999 |
FAU | RPS15 | ENSP00000431822 | ENSP00000466010 | Ubiquitin-like protein FUBI; FAU ubiquitin like and ribosomal protein S30 fusion. | Ribosomal protein S15. | 0.999 |
FAU | RPS18 | ENSP00000431822 | ENSP00000393241 | Ubiquitin-like protein FUBI; FAU ubiquitin like and ribosomal protein S30 fusion. | 40S ribosomal protein S18; Located at the top of the head of the 40S subunit, it contacts several helices of the 18S rRNA. | 0.999 |
GAGE12F | FAU | ENSP00000491865 | ENSP00000431822 | G antigen 12F. | Ubiquitin-like protein FUBI; FAU ubiquitin like and ribosomal protein S30 fusion. | 0.991 |
GAGE12F | GAGE12G | ENSP00000491865 | ENSP00000416249 | G antigen 12F. | G antigen 12G. | 0.999 |
GAGE12F | GAGE13 | ENSP00000491865 | ENSP00000483811 | G antigen 12F. | G antigen 13. | 0.798 |
GAGE12F | GAGE2A | ENSP00000491865 | ENSP00000355421 | G antigen 12F. | G antigen 2A. | 0.848 |
GAGE12F | RPL11 | ENSP00000491865 | ENSP00000496250 | G antigen 12F. | 60S ribosomal protein L11; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through [...] | 0.792 |
GAGE12F | RPL19 | ENSP00000491865 | ENSP00000225430 | G antigen 12F. | Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. | 0.793 |
GAGE12F | RPL5 | ENSP00000491865 | ENSP00000359345 | G antigen 12F. | 60S ribosomal protein L5; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through [...] | 0.792 |
GAGE12F | RPS11 | ENSP00000491865 | ENSP00000270625 | G antigen 12F. | Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. | 0.792 |
GAGE12F | RPS15 | ENSP00000491865 | ENSP00000466010 | G antigen 12F. | Ribosomal protein S15. | 0.792 |
GAGE12F | RPS18 | ENSP00000491865 | ENSP00000393241 | G antigen 12F. | 40S ribosomal protein S18; Located at the top of the head of the 40S subunit, it contacts several helices of the 18S rRNA. | 0.794 |
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