NPIPB9 protein (human) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

NPIPB9

Nuclear pore complex interacting protein family member B9; Belongs to the NPIP family. (429 aa)

Predicted Functional Partners:

FAM25G

0.664

OR10H5

0.578

FAM229B

0.571

RABEP2

0.551

MTRNR2L10

0.506

OR2AK2

0.506

WDR31

0.501

EFCAB13

0.489

FAM25A

0.479

EIF3CL

0.451

Your Current Organism:

Homo sapiens

NCBI taxonomy Id: 9606
Other names: H. sapiens, human, man

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EFCAB13	NPIPB9	ENSP00000332111	ENSP00000446902	EF-hand calcium-binding domain-containing protein 13; EF-hand calcium binding domain 13.	Nuclear pore complex interacting protein family member B9; Belongs to the NPIP family.	0.489
EFCAB13	OR10H5	ENSP00000332111	ENSP00000493242	EF-hand calcium-binding domain-containing protein 13; EF-hand calcium binding domain 13.	Olfactory receptor 10H5; Odorant receptor; Belongs to the G-protein coupled receptor 1 family.	0.464
EIF3CL	NPIPB9	ENSP00000370258	ENSP00000446902	Eukaryotic translation initiation factor 3 subunit C-like protein; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-term [...]	Nuclear pore complex interacting protein family member B9; Belongs to the NPIP family.	0.451
EIF3CL	RABEP2	ENSP00000370258	ENSP00000350934	Eukaryotic translation initiation factor 3 subunit C-like protein; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-term [...]	Rab GTPase-binding effector protein 2; Plays a role in membrane trafficking and in homotypic early endosome fusion. Participates in arteriogenesis by regulating vascular endothelial growth factor receptor 2/VEGFR2 cell surface expression and endosomal trafficking. By interacting with SDCCAG8, localizes to centrosomes and plays a critical role in ciliogenesis ; Belongs to the rabaptin family.	0.495
EIF3CL	WDR31	ENSP00000370258	ENSP00000363308	Eukaryotic translation initiation factor 3 subunit C-like protein; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-term [...]	WD repeat domain 31.	0.824
FAM229B	NPIPB9	ENSP00000357645	ENSP00000446902	Protein FAM229B; Family with sequence similarity 229 member B; Belongs to the FAM229 family.	Nuclear pore complex interacting protein family member B9; Belongs to the NPIP family.	0.571
FAM229B	OR2AK2	ENSP00000357645	ENSP00000493202	Protein FAM229B; Family with sequence similarity 229 member B; Belongs to the FAM229 family.	Olfactory receptor 2AK2; Odorant receptor; Belongs to the G-protein coupled receptor 1 family.	0.522
FAM25A	MTRNR2L10	ENSP00000342790	ENSP00000442159	Protein FAM25A; Family with sequence similarity 25 member A; Belongs to the FAM25 family.	Humanin-like 10; Plays a role as a neuroprotective and antiapoptotic factor. Belongs to the humanin family.	0.446
FAM25A	NPIPB9	ENSP00000342790	ENSP00000446902	Protein FAM25A; Family with sequence similarity 25 member A; Belongs to the FAM25 family.	Nuclear pore complex interacting protein family member B9; Belongs to the NPIP family.	0.479
FAM25G	MTRNR2L10	ENSP00000413896	ENSP00000442159	Family with sequence similarity 25 member G.	Humanin-like 10; Plays a role as a neuroprotective and antiapoptotic factor. Belongs to the humanin family.	0.621
FAM25G	NPIPB9	ENSP00000413896	ENSP00000446902	Family with sequence similarity 25 member G.	Nuclear pore complex interacting protein family member B9; Belongs to the NPIP family.	0.664
MTRNR2L10	FAM25A	ENSP00000442159	ENSP00000342790	Humanin-like 10; Plays a role as a neuroprotective and antiapoptotic factor. Belongs to the humanin family.	Protein FAM25A; Family with sequence similarity 25 member A; Belongs to the FAM25 family.	0.446
MTRNR2L10	FAM25G	ENSP00000442159	ENSP00000413896	Humanin-like 10; Plays a role as a neuroprotective and antiapoptotic factor. Belongs to the humanin family.	Family with sequence similarity 25 member G.	0.621
MTRNR2L10	NPIPB9	ENSP00000442159	ENSP00000446902	Humanin-like 10; Plays a role as a neuroprotective and antiapoptotic factor. Belongs to the humanin family.	Nuclear pore complex interacting protein family member B9; Belongs to the NPIP family.	0.506
NPIPB9	EFCAB13	ENSP00000446902	ENSP00000332111	Nuclear pore complex interacting protein family member B9; Belongs to the NPIP family.	EF-hand calcium-binding domain-containing protein 13; EF-hand calcium binding domain 13.	0.489
NPIPB9	EIF3CL	ENSP00000446902	ENSP00000370258	Nuclear pore complex interacting protein family member B9; Belongs to the NPIP family.	Eukaryotic translation initiation factor 3 subunit C-like protein; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-term [...]	0.451
NPIPB9	FAM229B	ENSP00000446902	ENSP00000357645	Nuclear pore complex interacting protein family member B9; Belongs to the NPIP family.	Protein FAM229B; Family with sequence similarity 229 member B; Belongs to the FAM229 family.	0.571
NPIPB9	FAM25A	ENSP00000446902	ENSP00000342790	Nuclear pore complex interacting protein family member B9; Belongs to the NPIP family.	Protein FAM25A; Family with sequence similarity 25 member A; Belongs to the FAM25 family.	0.479
NPIPB9	FAM25G	ENSP00000446902	ENSP00000413896	Nuclear pore complex interacting protein family member B9; Belongs to the NPIP family.	Family with sequence similarity 25 member G.	0.664
NPIPB9	MTRNR2L10	ENSP00000446902	ENSP00000442159	Nuclear pore complex interacting protein family member B9; Belongs to the NPIP family.	Humanin-like 10; Plays a role as a neuroprotective and antiapoptotic factor. Belongs to the humanin family.	0.506