ZSCAN5B protein (human) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ZSCAN5B

Zinc finger and SCAN domain-containing protein 5B; May be involved in transcriptional regulation. (495 aa)

Predicted Functional Partners:

ZSCAN5C

0.867

PSPC1

0.409

Your Current Organism:

Homo sapiens

NCBI taxonomy Id: 9606
Other names: H. sapiens, human, man

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PSPC1	ZSCAN5B	ENSP00000343966	ENSP00000466072	Paraspeckle component 1; Regulates, cooperatively with NONO and SFPQ, androgen receptor-mediated gene transcription activity in Sertoli cell line (By similarity). Binds to poly(A), poly(G) and poly(U) RNA homopolymers. Regulates the circadian clock by repressing the transcriptional activator activity of the CLOCK-ARNTL/BMAL1 heterodimer (By similarity). Together with NONO, required for the formation of nuclear paraspeckles. Plays a role in the regulation of DNA virus-mediated innate immune response by assembling into the HDP-RNP complex, a complex that serves as a platform for IRF3 pho [...]	Zinc finger and SCAN domain-containing protein 5B; May be involved in transcriptional regulation.	0.409
ZSCAN5B	PSPC1	ENSP00000466072	ENSP00000343966	Zinc finger and SCAN domain-containing protein 5B; May be involved in transcriptional regulation.	Paraspeckle component 1; Regulates, cooperatively with NONO and SFPQ, androgen receptor-mediated gene transcription activity in Sertoli cell line (By similarity). Binds to poly(A), poly(G) and poly(U) RNA homopolymers. Regulates the circadian clock by repressing the transcriptional activator activity of the CLOCK-ARNTL/BMAL1 heterodimer (By similarity). Together with NONO, required for the formation of nuclear paraspeckles. Plays a role in the regulation of DNA virus-mediated innate immune response by assembling into the HDP-RNP complex, a complex that serves as a platform for IRF3 pho [...]	0.409
ZSCAN5B	ZSCAN5C	ENSP00000466072	ENSP00000435234	Zinc finger and SCAN domain-containing protein 5B; May be involved in transcriptional regulation.	Zinc finger and SCAN domain-containing protein 5C; May be involved in transcriptional regulation.	0.867
ZSCAN5C	ZSCAN5B	ENSP00000435234	ENSP00000466072	Zinc finger and SCAN domain-containing protein 5C; May be involved in transcriptional regulation.	Zinc finger and SCAN domain-containing protein 5B; May be involved in transcriptional regulation.	0.867