Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDRT15 | CDRT4 | ENSP00000402355 | ENSP00000482523 | CMT1A duplicated region transcript 15. | CMT1A duplicated region transcript 4. | 0.621 |
CDRT15 | SMCO2 | ENSP00000402355 | ENSP00000387617 | CMT1A duplicated region transcript 15. | Single-pass membrane protein with coiled-coil domains 2. | 0.600 |
CDRT15 | TEKT3 | ENSP00000402355 | ENSP00000379263 | CMT1A duplicated region transcript 15. | Tektin-3; May be a structural component of the sperm flagellum. Required for normal sperm mobility. | 0.580 |
CDRT15 | TVP23B | ENSP00000402355 | ENSP00000305654 | CMT1A duplicated region transcript 15. | Trans-golgi network vesicle protein 23 homolog B; Belongs to the TVP23 family. | 0.714 |
CDRT15 | TVP23C | ENSP00000402355 | ENSP00000225576 | CMT1A duplicated region transcript 15. | Trans-golgi network vesicle protein 23 homolog C; Belongs to the TVP23 family. | 0.579 |
CDRT15 | TVP23C-CDRT4 | ENSP00000402355 | ENSP00000429865 | CMT1A duplicated region transcript 15. | Golgi apparatus membrane protein TVP23 homolog; TVP23C-CDRT4 readthrough. | 0.574 |
CDRT4 | CDRT15 | ENSP00000482523 | ENSP00000402355 | CMT1A duplicated region transcript 4. | CMT1A duplicated region transcript 15. | 0.621 |
CDRT4 | H0YIS7_HUMAN | ENSP00000482523 | ENSP00000450085 | CMT1A duplicated region transcript 4. | RNASEK-C17orf49 readthrough. | 0.571 |
CDRT4 | LRRC9 | ENSP00000482523 | ENSP00000493790 | CMT1A duplicated region transcript 4. | Leucine-rich repeat-containing protein 9; Leucine rich repeat containing 9. | 0.479 |
CDRT4 | SMCO2 | ENSP00000482523 | ENSP00000387617 | CMT1A duplicated region transcript 4. | Single-pass membrane protein with coiled-coil domains 2. | 0.507 |
CDRT4 | TEKT3 | ENSP00000482523 | ENSP00000379263 | CMT1A duplicated region transcript 4. | Tektin-3; May be a structural component of the sperm flagellum. Required for normal sperm mobility. | 0.580 |
CDRT4 | TVP23B | ENSP00000482523 | ENSP00000305654 | CMT1A duplicated region transcript 4. | Trans-golgi network vesicle protein 23 homolog B; Belongs to the TVP23 family. | 0.673 |
CDRT4 | TVP23C | ENSP00000482523 | ENSP00000225576 | CMT1A duplicated region transcript 4. | Trans-golgi network vesicle protein 23 homolog C; Belongs to the TVP23 family. | 0.742 |
CDRT4 | TVP23C-CDRT4 | ENSP00000482523 | ENSP00000429865 | CMT1A duplicated region transcript 4. | Golgi apparatus membrane protein TVP23 homolog; TVP23C-CDRT4 readthrough. | 0.737 |
CDRT4 | ULK1 | ENSP00000482523 | ENSP00000324560 | CMT1A duplicated region transcript 4. | Serine/threonine-protein kinase ULK1; Serine/threonine-protein kinase involved in autophagy in response to starvation. Acts upstream of phosphatidylinositol 3-kinase PIK3C3 to regulate the formation of autophagophores, the precursors of autophagosomes. Part of regulatory feedback loops in autophagy: acts both as a downstream effector and negative regulator of mammalian target of rapamycin complex 1 (mTORC1) via interaction with RPTOR. Activated via phosphorylation by AMPK and also acts as a regulator of AMPK by mediating phosphorylation of AMPK subunits PRKAA1, PRKAB2 and PRKAG1, leadi [...] | 0.493 |
CDRT4 | ULK2 | ENSP00000482523 | ENSP00000378914 | CMT1A duplicated region transcript 4. | Serine/threonine-protein kinase ULK2; Serine/threonine-protein kinase involved in autophagy in response to starvation. Acts upstream of phosphatidylinositol 3-kinase PIK3C3 to regulate the formation of autophagophores, the precursors of autophagosomes. Part of regulatory feedback loops in autophagy: acts both as a downstream effector and a negative regulator of mammalian target of rapamycin complex 1 (mTORC1) via interaction with RPTOR. Activated via phosphorylation by AMPK, also acts as a negative regulator of AMPK through phosphorylation of the AMPK subunits PRKAA1, PRKAB2 and PRKAG1 [...] | 0.497 |
H0YIS7_HUMAN | CDRT4 | ENSP00000450085 | ENSP00000482523 | RNASEK-C17orf49 readthrough. | CMT1A duplicated region transcript 4. | 0.571 |
LRRC9 | CDRT4 | ENSP00000493790 | ENSP00000482523 | Leucine-rich repeat-containing protein 9; Leucine rich repeat containing 9. | CMT1A duplicated region transcript 4. | 0.479 |
SMCO2 | CDRT15 | ENSP00000387617 | ENSP00000402355 | Single-pass membrane protein with coiled-coil domains 2. | CMT1A duplicated region transcript 15. | 0.600 |
SMCO2 | CDRT4 | ENSP00000387617 | ENSP00000482523 | Single-pass membrane protein with coiled-coil domains 2. | CMT1A duplicated region transcript 4. | 0.507 |
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