MRPS18B protein (human) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

MRPS18B

Mitochondrial ribosomal protein S18B; Belongs to the bacterial ribosomal protein bS18 family. Mitochondrion-specific ribosomal protein mS40 subfamily. (258 aa)

Predicted Functional Partners:

MRPS35

0.999

MRPS34

0.999

MRPS7

0.999

MRPS25

0.999

PTCD3

0.999

MRPS9

0.999

MRPS5

0.999

MRPS18C

0.999

TRMT10B

0.999

MRPS31

0.999

Your Current Organism:

Homo sapiens

NCBI taxonomy Id: 9606
Other names: H. sapiens, human, man

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MRPS18B	MRPS18C	ENSP00000259873	ENSP00000295491	Mitochondrial ribosomal protein S18B; Belongs to the bacterial ribosomal protein bS18 family. Mitochondrion-specific ribosomal protein mS40 subfamily.	Mitochondrial ribosomal protein S18C.	0.999
MRPS18B	MRPS25	ENSP00000259873	ENSP00000253686	Mitochondrial ribosomal protein S18B; Belongs to the bacterial ribosomal protein bS18 family. Mitochondrion-specific ribosomal protein mS40 subfamily.	Mitochondrial ribosomal protein S25.	0.999
MRPS18B	MRPS31	ENSP00000259873	ENSP00000315397	Mitochondrial ribosomal protein S18B; Belongs to the bacterial ribosomal protein bS18 family. Mitochondrion-specific ribosomal protein mS40 subfamily.	Mitochondrial ribosomal protein S31.	0.999
MRPS18B	MRPS34	ENSP00000259873	ENSP00000177742	Mitochondrial ribosomal protein S18B; Belongs to the bacterial ribosomal protein bS18 family. Mitochondrion-specific ribosomal protein mS40 subfamily.	28S ribosomal protein S34, mitochondrial; Required for mitochondrial translation, plays a role in maintaining the stability of the small ribosomal subunit and the 12S rRNA that are required for mitoribosome formation. Belongs to the mitochondrion-specific ribosomal protein mS34 family.	0.999
MRPS18B	MRPS35	ENSP00000259873	ENSP00000081029	Mitochondrial ribosomal protein S18B; Belongs to the bacterial ribosomal protein bS18 family. Mitochondrion-specific ribosomal protein mS40 subfamily.	Mitochondrial ribosomal protein S35.	0.999
MRPS18B	MRPS5	ENSP00000259873	ENSP00000272418	Mitochondrial ribosomal protein S18B; Belongs to the bacterial ribosomal protein bS18 family. Mitochondrion-specific ribosomal protein mS40 subfamily.	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	0.999
MRPS18B	MRPS7	ENSP00000259873	ENSP00000245539	Mitochondrial ribosomal protein S18B; Belongs to the bacterial ribosomal protein bS18 family. Mitochondrion-specific ribosomal protein mS40 subfamily.	Mitochondrial ribosomal protein S7.	0.999
MRPS18B	MRPS9	ENSP00000259873	ENSP00000258455	Mitochondrial ribosomal protein S18B; Belongs to the bacterial ribosomal protein bS18 family. Mitochondrion-specific ribosomal protein mS40 subfamily.	Mitochondrial ribosomal protein S9.	0.999
MRPS18B	PTCD3	ENSP00000259873	ENSP00000254630	Mitochondrial ribosomal protein S18B; Belongs to the bacterial ribosomal protein bS18 family. Mitochondrion-specific ribosomal protein mS40 subfamily.	Pentatricopeptide repeat domain-containing protein 3, mitochondrial; Mitochondrial RNA-binding protein that has a role in mitochondrial translation.	0.999
MRPS18B	TRMT10B	ENSP00000259873	ENSP00000297994	Mitochondrial ribosomal protein S18B; Belongs to the bacterial ribosomal protein bS18 family. Mitochondrion-specific ribosomal protein mS40 subfamily.	tRNA methyltransferase 10 homolog B; S-adenosyl-L-methionine-dependent guanine N(1)- methyltransferase that catalyzes the formation of N(1)-methylguanine at position 9 (m1G9) in tRNAs. Probably not able to catalyze formation of N(1)-methyladenine at position 9 (m1A9) in tRNAs.	0.999
MRPS18C	MRPS18B	ENSP00000295491	ENSP00000259873	Mitochondrial ribosomal protein S18C.	Mitochondrial ribosomal protein S18B; Belongs to the bacterial ribosomal protein bS18 family. Mitochondrion-specific ribosomal protein mS40 subfamily.	0.999
MRPS18C	MRPS25	ENSP00000295491	ENSP00000253686	Mitochondrial ribosomal protein S18C.	Mitochondrial ribosomal protein S25.	0.994
MRPS18C	MRPS31	ENSP00000295491	ENSP00000315397	Mitochondrial ribosomal protein S18C.	Mitochondrial ribosomal protein S31.	0.999
MRPS18C	MRPS34	ENSP00000295491	ENSP00000177742	Mitochondrial ribosomal protein S18C.	28S ribosomal protein S34, mitochondrial; Required for mitochondrial translation, plays a role in maintaining the stability of the small ribosomal subunit and the 12S rRNA that are required for mitoribosome formation. Belongs to the mitochondrion-specific ribosomal protein mS34 family.	0.997
MRPS18C	MRPS35	ENSP00000295491	ENSP00000081029	Mitochondrial ribosomal protein S18C.	Mitochondrial ribosomal protein S35.	0.995
MRPS18C	MRPS5	ENSP00000295491	ENSP00000272418	Mitochondrial ribosomal protein S18C.	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	0.999
MRPS18C	MRPS7	ENSP00000295491	ENSP00000245539	Mitochondrial ribosomal protein S18C.	Mitochondrial ribosomal protein S7.	0.997
MRPS18C	MRPS9	ENSP00000295491	ENSP00000258455	Mitochondrial ribosomal protein S18C.	Mitochondrial ribosomal protein S9.	0.998
MRPS18C	PTCD3	ENSP00000295491	ENSP00000254630	Mitochondrial ribosomal protein S18C.	Pentatricopeptide repeat domain-containing protein 3, mitochondrial; Mitochondrial RNA-binding protein that has a role in mitochondrial translation.	0.997
MRPS18C	TRMT10B	ENSP00000295491	ENSP00000297994	Mitochondrial ribosomal protein S18C.	tRNA methyltransferase 10 homolog B; S-adenosyl-L-methionine-dependent guanine N(1)- methyltransferase that catalyzes the formation of N(1)-methylguanine at position 9 (m1G9) in tRNAs. Probably not able to catalyze formation of N(1)-methyladenine at position 9 (m1A9) in tRNAs.	0.975