STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRSF3Serine and arginine rich splicing factor 3. (164 aa)    
Predicted Functional Partners:
SRSF1
Serine and arginine rich splicing factor 1.
   
0.997
SRSF7
Serine and arginine rich splicing factor 7.
   
0.996
ENSCAFP00000050189
RRM domain-containing protein.
   
 0.995
TRA2B
Transformer 2 beta homolog.
   
 0.995
SRSF2
Serine and arginine rich splicing factor 2.
   
0.983
ENSCAFP00000051625
RRM domain-containing protein.
   
 0.983
SRSF5
Serine and arginine rich splicing factor 5.
   
0.982
EIF4A3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
   
 0.981
SRSF9
Serine and arginine rich splicing factor 9.
   
0.981
RBM8A
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.980
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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