Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM71F2Family with sequence similarity 71 member F2. (300 aa)    
Predicted Functional Partners:
RAB2A
Ras-related protein Rab-2A; Required for protein transport from the endoplasmic reticulum to the Golgi complex.
   
 0.562
RAB2B
RAB2B, member RAS oncogene family.
   
 0.562
ENSCAFP00000050945
Uncharacterized protein.
   
 0.562
TNR
Tenascin R.
   
  0.433
TNC
Tenascin C.
   
  0.433
TNN
Tenascin N.
    
  0.424
NAA25
N(alpha)-acetyltransferase 25, NatB auxiliary subunit.
   
 
 0.410
SEZ6L2
Seizure related 6 homolog like 2.
    
 0.400
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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