STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFX4Regulatory factor X4. (744 aa)    
Predicted Functional Partners:
RFXAP
Regulatory factor X associated protein.
    
 0.767
RFXANK
Regulatory factor X associated ankyrin containing protein.
    
 0.681
SS18L1
SS18L1 subunit of BAF chromatin remodeling complex.
      
 0.625
FOXJ1
Forkhead box J1.
    
 
 0.610
TENT5A
Terminal nucleotidyltransferase 5A.
   
  
 0.608
SGSM1
Small G protein signaling modulator 1.
      
 0.551
CELF6
Uncharacterized protein.
   
  
 0.539
PKNOX2
PBX/knotted 1 homeobox 2.
      
 0.524
MNX1
Motor neuron and pancreas homeobox 1.
      
 0.523
PTPRN
Protein tyrosine phosphatase receptor type N.
      
 0.520
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.