STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LIMS1Uncharacterized protein. (567 aa)    
Predicted Functional Partners:
ILK
Integrin linked kinase.
   
 
 0.876
RSU1
Ras suppressor protein 1.
   
 
 0.856
PARVG
Parvin gamma.
   
 
 0.813
NCK2
Cytoplasmic protein.
    
 
 0.738
PARVA
Parvin alpha.
   
 
 0.737
PARVB
Parvin beta.
   
 
 0.737
FERMT1
Fermitin family member 1.
   
 
 0.631
FERMT2
Fermitin family member 2.
   
 
 0.631
ZDHHC14
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 
 0.610
IL1RAPL1
Interleukin 1 receptor accessory protein like 1.
      
 0.591
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.