STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIMS1Uncharacterized protein. (567 aa)    
Predicted Functional Partners:
RSU1
Ras suppressor protein 1.
   
 0.993
ILK
Integrin linked kinase.
   
 0.940
PARVB
Parvin beta.
   
 0.927
PARVA
Parvin alpha.
   
 0.921
PARVG
Parvin gamma.
   
 
 0.818
NCK2
Cytoplasmic protein.
    
 
 0.707
CTNNA2
Catenin alpha 2.
   
  
 0.621
ASB12
Ankyrin repeat and SOCS box containing 12.
   
 
 0.605
ITGA4
Integrin subunit alpha 4; Belongs to the integrin alpha chain family.
      
 0.602
COL24A1
Collagen type XXIV alpha 1 chain.
      
 0.579
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.