Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSCAFP00000054759 | ENSCAFP00000061156 | ENSCAFP00000054759 | ENSCAFP00000061156 | Ubiquitin-like domain-containing protein. | Ubiquitin-like domain-containing protein. | 0.913 |
ENSCAFP00000054759 | ENSCAFP00000061960 | ENSCAFP00000054759 | ENSCAFP00000061960 | Ubiquitin-like domain-containing protein. | annotation not available | 0.829 |
ENSCAFP00000054759 | FAU | ENSCAFP00000054759 | ENSCAFP00000033982 | Ubiquitin-like domain-containing protein. | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 0.912 |
ENSCAFP00000054759 | SRP14 | ENSCAFP00000054759 | ENSCAFP00000041095 | Ubiquitin-like domain-containing protein. | Signal recognition particle 14 kDa protein; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding. | 0.621 |
ENSCAFP00000054759 | SRP19 | ENSCAFP00000054759 | ENSCAFP00000042903 | Ubiquitin-like domain-containing protein. | Signal recognition particle 19. | 0.829 |
ENSCAFP00000054759 | SRP54 | ENSCAFP00000054759 | ENSCAFP00000050551 | Ubiquitin-like domain-containing protein. | Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein); Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.969 |
ENSCAFP00000054759 | SRP68 | ENSCAFP00000054759 | ENSCAFP00000007483 | Ubiquitin-like domain-containing protein. | Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP68 binds the 7S RNA, SRP72 binds to this complex subsequently. This ribonucleoprotein complex might interact directly with the docking protein in the ER membrane and possibly participate in the elongation arrest function. | 0.970 |
ENSCAFP00000054759 | SRP9 | ENSCAFP00000054759 | ENSCAFP00000023824 | Ubiquitin-like domain-containing protein. | Signal recognition particle 9 kDa protein; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding. | 0.887 |
ENSCAFP00000061156 | ENSCAFP00000054759 | ENSCAFP00000061156 | ENSCAFP00000054759 | Ubiquitin-like domain-containing protein. | Ubiquitin-like domain-containing protein. | 0.913 |
ENSCAFP00000061156 | ENSCAFP00000061960 | ENSCAFP00000061156 | ENSCAFP00000061960 | Ubiquitin-like domain-containing protein. | annotation not available | 0.829 |
ENSCAFP00000061156 | FAU | ENSCAFP00000061156 | ENSCAFP00000033982 | Ubiquitin-like domain-containing protein. | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 0.909 |
ENSCAFP00000061156 | SRP14 | ENSCAFP00000061156 | ENSCAFP00000041095 | Ubiquitin-like domain-containing protein. | Signal recognition particle 14 kDa protein; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding. | 0.621 |
ENSCAFP00000061156 | SRP19 | ENSCAFP00000061156 | ENSCAFP00000042903 | Ubiquitin-like domain-containing protein. | Signal recognition particle 19. | 0.829 |
ENSCAFP00000061156 | SRP54 | ENSCAFP00000061156 | ENSCAFP00000050551 | Ubiquitin-like domain-containing protein. | Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein); Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.969 |
ENSCAFP00000061156 | SRP68 | ENSCAFP00000061156 | ENSCAFP00000007483 | Ubiquitin-like domain-containing protein. | Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP68 binds the 7S RNA, SRP72 binds to this complex subsequently. This ribonucleoprotein complex might interact directly with the docking protein in the ER membrane and possibly participate in the elongation arrest function. | 0.970 |
ENSCAFP00000061156 | SRP9 | ENSCAFP00000061156 | ENSCAFP00000023824 | Ubiquitin-like domain-containing protein. | Signal recognition particle 9 kDa protein; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding. | 0.887 |
ENSCAFP00000061960 | ENSCAFP00000054759 | ENSCAFP00000061960 | ENSCAFP00000054759 | annotation not available | Ubiquitin-like domain-containing protein. | 0.829 |
ENSCAFP00000061960 | ENSCAFP00000061156 | ENSCAFP00000061960 | ENSCAFP00000061156 | annotation not available | Ubiquitin-like domain-containing protein. | 0.829 |
ENSCAFP00000061960 | FAU | ENSCAFP00000061960 | ENSCAFP00000033982 | annotation not available | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 0.829 |
ENSCAFP00000061960 | SRP14 | ENSCAFP00000061960 | ENSCAFP00000041095 | annotation not available | Signal recognition particle 14 kDa protein; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding. | 0.918 |
page 1 of 5