STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FNDC4Fibronectin type III domain containing 4. (229 aa)    
Predicted Functional Partners:
ZNF512
Zinc finger protein 512.
      
 0.774
CCDC61
Coiled-coil domain containing 61.
      
 0.733
IGSF8
Immunoglobulin superfamily member 8.
      
 0.670
POLE4
CBFD_NFYB_HMF domain-containing protein.
      
 0.653
PNPO
Pyridoxamine 5'-phosphate oxidase.
      
 0.601
LYRM7
LYR motif containing 7; Belongs to the complex I LYR family.
      
 0.597
POLR2D
RNA polymerase II subunit D.
      
 0.593
RECQL5
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
      
 0.592
POLR2G
RNA polymerase II subunit G.
      
 0.592
BATF2
Basic leucine zipper ATF-like transcription factor 2.
      
 0.591
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.