STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEMA4FSsemaphorin 4F; Belongs to the semaphorin family. (770 aa)    
Predicted Functional Partners:
PLXNB2
Plexin B2.
    
 0.938
PLXNB1
Plexin B1.
    
 0.866
PLXNB3
Plexin B3.
    
 0.866
SEMA4B
Semaphorin 4B; Belongs to the semaphorin family.
    
 0.678
SLIT1
Slit guidance ligand 1.
      
 0.654
PCGF1
Polycomb group ring finger 1.
    
 
 0.622
SEMA4A
Semaphorin 4A; Belongs to the semaphorin family.
    
 0.622
KCNIP4
Potassium voltage-gated channel interacting protein 4.
      
 0.598
RNF135
Ring finger protein 135.
      
 0.597
DQX1
DEAQ-box RNA dependent ATPase 1.
   
 
 0.596
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.