ERLIN1 protein (Canis lupus familiaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Canis lupus familiaris

NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMFR	ERLIN1	ENSCAFP00000013489	ENSCAFP00000014077	Autocrine motility factor receptor.	ER lipid raft associated 1.	0.844
AMFR	ERLIN2	ENSCAFP00000013489	ENSCAFP00000009309	Autocrine motility factor receptor.	ER lipid raft associated 2.	0.938
AMFR	RNF5	ENSCAFP00000013489	ENSCAFP00000001106	Autocrine motility factor receptor.	Ring finger protein 5.	0.822
AMFR	SYVN1	ENSCAFP00000013489	ENSCAFP00000059399	Autocrine motility factor receptor.	Synoviolin 1.	0.893
AMFR	TMUB1	ENSCAFP00000013489	ENSCAFP00000007076	Autocrine motility factor receptor.	Transmembrane and ubiquitin like domain containing 1.	0.664
C12H6orf120	ERLIN1	ENSCAFP00000006032	ENSCAFP00000014077	Chromosome 12 C6orf120 homolog.	ER lipid raft associated 1.	0.809
C12H6orf120	ERLIN2	ENSCAFP00000006032	ENSCAFP00000009309	Chromosome 12 C6orf120 homolog.	ER lipid raft associated 2.	0.693
C12H6orf120	RNF170	ENSCAFP00000006032	ENSCAFP00000008078	Chromosome 12 C6orf120 homolog.	Ring finger protein 170.	0.689
C12H6orf120	RNF5	ENSCAFP00000006032	ENSCAFP00000001106	Chromosome 12 C6orf120 homolog.	Ring finger protein 5.	0.534
C12H6orf120	TMUB1	ENSCAFP00000006032	ENSCAFP00000007076	Chromosome 12 C6orf120 homolog.	Transmembrane and ubiquitin like domain containing 1.	0.692
C12H6orf120	TMUB2	ENSCAFP00000006032	ENSCAFP00000040618	Chromosome 12 C6orf120 homolog.	Transmembrane and ubiquitin like domain containing 2.	0.580
CHAMP1	ERLIN1	ENSCAFP00000039120	ENSCAFP00000014077	Chromosome alignment maintaining phosphoprotein 1.	ER lipid raft associated 1.	0.795
DUSP3	ERLIN1	ENSCAFP00000041069	ENSCAFP00000014077	Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	ER lipid raft associated 1.	0.795
DUSP3	ERLIN2	ENSCAFP00000041069	ENSCAFP00000009309	Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	ER lipid raft associated 2.	0.678
DUSP3	TMUB1	ENSCAFP00000041069	ENSCAFP00000007076	Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Transmembrane and ubiquitin like domain containing 1.	0.572
ERLIN1	AMFR	ENSCAFP00000014077	ENSCAFP00000013489	ER lipid raft associated 1.	Autocrine motility factor receptor.	0.844
ERLIN1	C12H6orf120	ENSCAFP00000014077	ENSCAFP00000006032	ER lipid raft associated 1.	Chromosome 12 C6orf120 homolog.	0.809
ERLIN1	CHAMP1	ENSCAFP00000014077	ENSCAFP00000039120	ER lipid raft associated 1.	Chromosome alignment maintaining phosphoprotein 1.	0.795
ERLIN1	DUSP3	ENSCAFP00000014077	ENSCAFP00000041069	ER lipid raft associated 1.	Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.795
ERLIN1	ERLIN2	ENSCAFP00000014077	ENSCAFP00000009309	ER lipid raft associated 1.	ER lipid raft associated 2.	0.999