Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GKN2 | TFF1 | ENSCAFP00000030578 | ENSCAFP00000050000 | Gastrokine 2. | Trefoil factor 1; Stabilizer of the mucous gel overlying the gastrointestinal mucosa that provides a physical barrier against various noxious agents. | 0.686 |
LOC111092171 | TFF1 | ENSCAFP00000009968 | ENSCAFP00000050000 | Double-headed protease inhibitor, submandibular gland; This inhibitor is composed of two homologous actively inhibiting halves: one which inhibits trypsin, the other which inhibits elastase. | Trefoil factor 1; Stabilizer of the mucous gel overlying the gastrointestinal mucosa that provides a physical barrier against various noxious agents. | 0.446 |
PLAC8 | TFF1 | ENSCAFP00000043805 | ENSCAFP00000050000 | Placenta associated 8. | Trefoil factor 1; Stabilizer of the mucous gel overlying the gastrointestinal mucosa that provides a physical barrier against various noxious agents. | 0.482 |
SPINK5 | TFF1 | ENSCAFP00000009965 | ENSCAFP00000050000 | Serine peptidase inhibitor, Kazal type 5. | Trefoil factor 1; Stabilizer of the mucous gel overlying the gastrointestinal mucosa that provides a physical barrier against various noxious agents. | 0.470 |
TFF1 | GKN2 | ENSCAFP00000050000 | ENSCAFP00000030578 | Trefoil factor 1; Stabilizer of the mucous gel overlying the gastrointestinal mucosa that provides a physical barrier against various noxious agents. | Gastrokine 2. | 0.686 |
TFF1 | LOC111092171 | ENSCAFP00000050000 | ENSCAFP00000009968 | Trefoil factor 1; Stabilizer of the mucous gel overlying the gastrointestinal mucosa that provides a physical barrier against various noxious agents. | Double-headed protease inhibitor, submandibular gland; This inhibitor is composed of two homologous actively inhibiting halves: one which inhibits trypsin, the other which inhibits elastase. | 0.446 |
TFF1 | PLAC8 | ENSCAFP00000050000 | ENSCAFP00000043805 | Trefoil factor 1; Stabilizer of the mucous gel overlying the gastrointestinal mucosa that provides a physical barrier against various noxious agents. | Placenta associated 8. | 0.482 |
TFF1 | SPINK5 | ENSCAFP00000050000 | ENSCAFP00000009965 | Trefoil factor 1; Stabilizer of the mucous gel overlying the gastrointestinal mucosa that provides a physical barrier against various noxious agents. | Serine peptidase inhibitor, Kazal type 5. | 0.470 |