Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HTR3A | HTR3B | ENSCAFP00000061380 | ENSCAFP00000019996 | 5-hydroxytryptamine receptor 3A; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 5-hydroxytryptamine receptor 3B; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 0.934 |
HTR3A | LOC100856260 | ENSCAFP00000061380 | ENSCAFP00000017895 | 5-hydroxytryptamine receptor 3A; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 0.911 |
HTR3A | LOC478649 | ENSCAFP00000061380 | ENSCAFP00000017871 | 5-hydroxytryptamine receptor 3A; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 5-hydroxytryptamine receptor 3D; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 0.911 |
HTR3A | LOC607416 | ENSCAFP00000061380 | ENSCAFP00000017883 | 5-hydroxytryptamine receptor 3A; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 5-hydroxytryptamine receptor 3C; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 0.911 |
HTR3B | HTR3A | ENSCAFP00000019996 | ENSCAFP00000061380 | 5-hydroxytryptamine receptor 3B; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 5-hydroxytryptamine receptor 3A; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 0.934 |
HTR3B | LOC100856260 | ENSCAFP00000019996 | ENSCAFP00000017895 | 5-hydroxytryptamine receptor 3B; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 0.574 |
HTR3B | LOC478649 | ENSCAFP00000019996 | ENSCAFP00000017871 | 5-hydroxytryptamine receptor 3B; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 5-hydroxytryptamine receptor 3D; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 0.915 |
HTR3B | LOC607416 | ENSCAFP00000019996 | ENSCAFP00000017883 | 5-hydroxytryptamine receptor 3B; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 5-hydroxytryptamine receptor 3C; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 0.915 |
LOC100856260 | HTR3A | ENSCAFP00000017895 | ENSCAFP00000061380 | Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 5-hydroxytryptamine receptor 3A; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 0.911 |
LOC100856260 | HTR3B | ENSCAFP00000017895 | ENSCAFP00000019996 | Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 5-hydroxytryptamine receptor 3B; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 0.574 |
LOC100856260 | LOC478649 | ENSCAFP00000017895 | ENSCAFP00000017871 | Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 5-hydroxytryptamine receptor 3D; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 0.505 |
LOC100856260 | LOC607416 | ENSCAFP00000017895 | ENSCAFP00000017883 | Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 5-hydroxytryptamine receptor 3C; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 0.505 |
LOC100856260 | RIC3 | ENSCAFP00000017895 | ENSCAFP00000010273 | Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | RIC3 acetylcholine receptor chaperone. | 0.456 |
LOC100856260 | WDR87 | ENSCAFP00000017895 | ENSCAFP00000008965 | Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | WD repeat domain 87. | 0.472 |
LOC478649 | HTR3A | ENSCAFP00000017871 | ENSCAFP00000061380 | 5-hydroxytryptamine receptor 3D; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 5-hydroxytryptamine receptor 3A; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 0.911 |
LOC478649 | HTR3B | ENSCAFP00000017871 | ENSCAFP00000019996 | 5-hydroxytryptamine receptor 3D; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 5-hydroxytryptamine receptor 3B; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 0.915 |
LOC478649 | LOC100856260 | ENSCAFP00000017871 | ENSCAFP00000017895 | 5-hydroxytryptamine receptor 3D; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 0.505 |
LOC478649 | LOC607416 | ENSCAFP00000017871 | ENSCAFP00000017883 | 5-hydroxytryptamine receptor 3D; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 5-hydroxytryptamine receptor 3C; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 0.903 |
LOC478649 | RIC3 | ENSCAFP00000017871 | ENSCAFP00000010273 | 5-hydroxytryptamine receptor 3D; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | RIC3 acetylcholine receptor chaperone. | 0.456 |
LOC478649 | WDR87 | ENSCAFP00000017871 | ENSCAFP00000008965 | 5-hydroxytryptamine receptor 3D; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | WD repeat domain 87. | 0.465 |
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