STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL6A3Collagen type VI alpha 3 chain. (3169 aa)    
Predicted Functional Partners:
GP6
Glycoprotein VI platelet.
   
 
 0.901
COL6A1
Collagen type VI alpha 1 chain.
   
 
0.824
ITGA5
Integrin subunit alpha 5; Belongs to the integrin alpha chain family.
   
 0.823
COL1A2
Collagen alpha-2(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen); Belongs to the fibrillar collagen family.
   
 
0.814
PELO
Integrin subunit alpha 1; Belongs to the integrin alpha chain family.
   
0.800
COL1A1
Collagen alpha-1(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen).
   
 
0.796
ITGB3
Integrin beta; Belongs to the integrin beta chain family.
   
 0.790
COL3A1
Collagen type III alpha 1 chain.
   
 
0.748
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.737
ITGA3
Integrin subunit alpha 3; Belongs to the integrin alpha chain family.
   
 0.736
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.