STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FN1Fibronectin; Fibronectins bind cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin. Fibronectins are involved in cell adhesion, cell motility, opsonization, wound healing, and maintenance of cell shape. Involved in osteoblast compaction through the fibronectin fibrillogenesis cell-mediated matrix assembly process, essential for osteoblast mineralization. Participates in the regulation of type I collagen deposition by osteoblasts (By similarity). (2586 aa)    
Predicted Functional Partners:
ITGA5
Integrin subunit alpha 5; Belongs to the integrin alpha chain family.
   
 0.995
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.994
ITGAV
Integrin subunit alpha V; Belongs to the integrin alpha chain family.
   
 0.986
ITGB3
Integrin beta; Belongs to the integrin beta chain family.
   
 0.984
SDC4
Syndecan 4.
   
 0.962
ITGB5
Integrin beta; Belongs to the integrin beta chain family.
   
 0.955
ITGB6
Integrin beta; Belongs to the integrin beta chain family.
    
 0.953
ITGB2
Integrin beta.
    
 0.949
ITGB7
Integrin beta; Belongs to the integrin beta chain family.
    
 0.941
ITGA8
Integrin subunit alpha 8; Belongs to the integrin alpha chain family.
    
 0.940
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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