STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNAPC1Small nuclear RNA activating complex polypeptide 1. (375 aa)    
Predicted Functional Partners:
SNAPC3
Small nuclear RNA activating complex polypeptide 3.
   
 0.994
SNAPC4
Small nuclear RNA activating complex polypeptide 4.
    
 0.992
SNAPC5
Small nuclear RNA activating complex polypeptide 5.
    
 0.987
SNAPC2
Small nuclear RNA activating complex polypeptide 2.
    
 0.945
GTF2B
General transcription factor IIB.
   
 0.870
TBP
TATA-box binding protein.
   
 0.810
GTF2A1
General transcription factor IIA subunit 1.
   
  0.758
GTF2A2
General transcription factor IIA subunit 2.
   
  0.693
MFF
Mitochondrial fission factor.
      
 0.681
BDP1
B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.
   
 0.646
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.