STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNAPC1Small nuclear RNA activating complex polypeptide 1. (375 aa)    
Predicted Functional Partners:
SNAPC4
Small nuclear RNA activating complex polypeptide 4.
    
 0.998
SNAPC5
Small nuclear RNA activating complex polypeptide 5.
    
 0.995
SNAPC3
Small nuclear RNA activating complex polypeptide 3.
   
 
 0.982
SNAPC2
Small nuclear RNA activating complex polypeptide 2.
    
 
 0.961
BDP1
B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.
   
 0.910
POU2F1
POU domain protein.
    
 0.907
GTF2B
General transcription factor IIB.
    
 0.895
POLR3D
RNA polymerase III subunit D.
    
 0.829
BRF2
BRF2 RNA polymerase III transcription initiation factor subunit.
   
 0.797
POLR1C
RNA polymerase I and III subunit C.
   
 0.795
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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