Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C1QA | CD68 | ENSCAFP00000040393 | ENSCAFP00000024483 | Complement C1q A chain. | CD68 molecule. | 0.781 |
C1QA | CSF1R | ENSCAFP00000040393 | ENSCAFP00000053521 | Complement C1q A chain. | Colony stimulating factor 1 receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | 0.895 |
C1QA | TREM2 | ENSCAFP00000040393 | ENSCAFP00000051676 | Complement C1q A chain. | Triggering receptor expressed on myeloid cells 2. | 0.883 |
CD68 | C1QA | ENSCAFP00000024483 | ENSCAFP00000040393 | CD68 molecule. | Complement C1q A chain. | 0.781 |
CD68 | CSF1 | ENSCAFP00000024483 | ENSCAFP00000059552 | CD68 molecule. | Colony stimulating factor 1. | 0.663 |
CD68 | CSF1R | ENSCAFP00000024483 | ENSCAFP00000053521 | CD68 molecule. | Colony stimulating factor 1 receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | 0.862 |
CD68 | TREM2 | ENSCAFP00000024483 | ENSCAFP00000051676 | CD68 molecule. | Triggering receptor expressed on myeloid cells 2. | 0.950 |
CSF1 | CD68 | ENSCAFP00000059552 | ENSCAFP00000024483 | Colony stimulating factor 1. | CD68 molecule. | 0.663 |
CSF1 | CSF1R | ENSCAFP00000059552 | ENSCAFP00000053521 | Colony stimulating factor 1. | Colony stimulating factor 1 receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | 0.999 |
CSF1 | GRB2 | ENSCAFP00000059552 | ENSCAFP00000049390 | Colony stimulating factor 1. | Growth factor receptor bound protein 2. | 0.421 |
CSF1 | IL34 | ENSCAFP00000059552 | ENSCAFP00000056375 | Colony stimulating factor 1. | Interleukin 34. | 0.980 |
CSF1 | KITLG | ENSCAFP00000059552 | ENSCAFP00000066357 | Colony stimulating factor 1. | Processed kit ligand; Stimulates the proliferation of mast cells. Able to augment the proliferation of both myeloid and lymphoid hematopoietic progenitors in bone marrow culture. Mediates also cell-cell adhesion. Acts synergistically with other cytokines, probably interleukins. | 0.516 |
CSF1 | TREM2 | ENSCAFP00000059552 | ENSCAFP00000051676 | Colony stimulating factor 1. | Triggering receptor expressed on myeloid cells 2. | 0.580 |
CSF1R | C1QA | ENSCAFP00000053521 | ENSCAFP00000040393 | Colony stimulating factor 1 receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | Complement C1q A chain. | 0.895 |
CSF1R | CD68 | ENSCAFP00000053521 | ENSCAFP00000024483 | Colony stimulating factor 1 receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | CD68 molecule. | 0.862 |
CSF1R | CSF1 | ENSCAFP00000053521 | ENSCAFP00000059552 | Colony stimulating factor 1 receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | Colony stimulating factor 1. | 0.999 |
CSF1R | GRB2 | ENSCAFP00000053521 | ENSCAFP00000049390 | Colony stimulating factor 1 receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | Growth factor receptor bound protein 2. | 0.849 |
CSF1R | IL34 | ENSCAFP00000053521 | ENSCAFP00000056375 | Colony stimulating factor 1 receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | Interleukin 34. | 0.999 |
CSF1R | KITLG | ENSCAFP00000053521 | ENSCAFP00000066357 | Colony stimulating factor 1 receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | Processed kit ligand; Stimulates the proliferation of mast cells. Able to augment the proliferation of both myeloid and lymphoid hematopoietic progenitors in bone marrow culture. Mediates also cell-cell adhesion. Acts synergistically with other cytokines, probably interleukins. | 0.936 |
CSF1R | PDGFB | ENSCAFP00000053521 | ENSCAFP00000056148 | Colony stimulating factor 1 receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | Platelet-derived growth factor subunit B; Growth factor that plays an essential role in the regulation of embryonic development, cell proliferation, cell migration, survival and chemotaxis. Potent mitogen for cells of mesenchymal origin. Required for normal proliferation and recruitment of pericytes and vascular smooth muscle cells in the central nervous system, skin, lung, heart and placenta. Required for normal blood vessel development, and for normal development of kidney glomeruli. Plays an important role in wound healing. Signaling is modulated by the formation of heterodimers wit [...] | 0.877 |
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