STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOXF1Forkhead box F1. (354 aa)    
Predicted Functional Partners:
BASP1
Brain abundant membrane attached signal protein 1.
      
 0.670
PAX1
Paired box 1.
   
  
 0.642
CA12
Carbonic anhydrase 12; Belongs to the alpha-carbonic anhydrase family.
   
  
 0.604
MYOCD
Myocardin.
   
 
 0.591
SRF
Serum response factor.
    
 
 0.527
GLI2
GLI family zinc finger 2.
    
 
 0.516
HOXB5
Homeobox B5.
   
 
 0.506
FOXL1
Forkhead box L1.
      
0.503
GLI3
GLI family zinc finger 3.
    
 
 0.487
EMC8
ER membrane protein complex subunit 8.
      
 0.484
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.