STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF220Ring finger protein 220. (566 aa)    
Predicted Functional Partners:
CCDC24
Uncharacterized protein.
      
 0.936
ERI3
ERI1 exoribonuclease family member 3.
   
  
 0.900
EPPK1
Uncharacterized protein.
    
 
 0.657
TMEM53
Transmembrane protein 53.
   
  
 0.645
SP9
Sp9 transcription factor.
      
 0.589
LRIG3
Leucine rich repeats and immunoglobulin like domains 3.
    
 
 0.545
ASB13
Ankyrin repeat and SOCS box containing 13.
    
 
 0.542
SH3RF1
SH3 domain containing ring finger 1.
   
 
 0.536
NRBP2
Nuclear receptor binding protein 2.
   
  
 0.523
SLC6A9
Solute carrier family 6 member 9.
      
 0.518
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.