STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J9P6X8_CANLFUncharacterized protein. (1905 aa)    
Predicted Functional Partners:
GOLGB1
Golgin B1.
   
  
 0.784
ARNT
Aryl hydrocarbon receptor nuclear translocator.
    
 
 0.587
ARNT2
Aryl hydrocarbon receptor nuclear translocator 2.
    
 
 0.587
GCC2
GRIP and coiled-coil domain containing 2.
   
 
 0.581
GOLGA2
Uncharacterized protein.
   
 0.552
IFT20
Intraflagellar transport 20.
   
 
 0.535
TMEM107
Transmembrane protein 107.
      
 0.522
GOLGA3
Golgin A3.
   
 0.500
CCDC70
Coiled-coil domain containing 70.
   
 0.490
RPRD2
Regulation of nuclear pre-mRNA domain containing 2.
   
 
 0.487
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.