STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH20Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (801 aa)    
Predicted Functional Partners:
ABT1
Activator of basal transcription 1.
      
 0.654
OPRL1
Opioid related nociceptin receptor 1.
      
 0.637
FRMD5
FERM domain containing 5.
    
 
 0.565
AMZ2
Archaelysin family metallopeptidase 2.
      
 0.561
AKAP5
A-kinase anchoring protein 5.
      
 0.558
LURAP1L
Leucine rich adaptor protein 1 like.
      
 0.532
CLDND1
Claudin domain containing 1.
      
 0.526
RNF32
Ring finger protein 32.
      
 0.525
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
      
 0.521
OPALIN
Oligodendrocytic myelin paranodal and inner loop protein.
   
  
 0.515
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.