STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCF19Transcription factor 19. (572 aa)    
Predicted Functional Partners:
RNF39
Ring finger protein 39.
   
  
 0.919
ABCF1
ATP binding cassette subfamily F member 1.
   
  
 0.862
C12H6orf15
Chromosome 12 C6orf15 homolog.
      
 0.851
GNL1
G protein nucleolar 1 (putative).
   
  
 0.844
GPSM3
G protein signaling modulator 3.
   
 
 0.810
FGD2
FYVE, RhoGEF and PH domain containing 2.
   
  
 0.809
PPP1R11
Protein phosphatase 1 regulatory inhibitor subunit 11.
   
  
 0.787
CCHCR1
Coiled-coil alpha-helical rod protein 1.
   
  
 0.758
PRC1
Protein regulator of cytokinesis 1.
   
  
 0.731
RRM2
Ribonucleotide reductase regulatory subunit M2.
   
  
 0.718
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.