STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS13BVacuolar protein sorting 13 homolog B. (4019 aa)    
Predicted Functional Partners:
TBC1D24
Uncharacterized protein.
   
  
 0.695
NAALADL2
N-acetylated alpha-linked acidic dipeptidase like 2.
   
  
 0.684
TMEM117
Transmembrane protein 117.
      
 0.677
DCAF13
DDB1 and CUL4 associated factor 13.
   
  
 0.674
TMEM161B
Transmembrane protein 161B.
   
  
 0.672
VPS13A
Vacuolar protein sorting 13 homolog A.
   
  
0.630
TUBGCP6
Tubulin gamma complex associated protein 6.
   
  
 0.599
KBTBD12
Kelch repeat and BTB domain containing 12.
      
 0.597
SLC37A4
MFS domain-containing protein.
   
  
 0.597
ELANE
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
      
 0.597
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.