STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTLL8Tubulin tyrosine ligase like 8. (924 aa)    
Predicted Functional Partners:
LOC608483
Uncharacterized protein.
      
 0.741
LRRC63
Leucine rich repeat containing 63.
   
 
 0.699
RPGR
X-linked retinitis pigmentosa GTPase regulator; Could be a guanine-nucleotide releasing factor. Plays a role in ciliogenesis. Probably regulates cilia formation by regulating actin stress filaments and cell contractility. May be involved in microtubule organization and regulation of transport in primary cilia. Plays an important role in photoreceptor integrity. May play a critical role in spermatogenesis and in intraflagellar transport processes.
      
 0.647
TTLL5
Tubulin tyrosine ligase like 5.
      
 0.617
TTLL7
Tubulin tyrosine ligase like 7.
   
  
0.542
DCP1A
Decapping mRNA 1A.
    
 
 0.520
AK9
Adenylate kinase 9.
     
  0.511
NUDT12
Nudix hydrolase 12.
    
  0.498
TTLL11
Tubulin tyrosine ligase like 11.
   
  
 0.471
TTLL12
Tubulin tyrosine ligase like 12.
      
 0.470
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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