STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKHD1L1PKHD1 like 1. (4263 aa)    
Predicted Functional Partners:
CSMD3
CUB and Sushi multiple domains 3.
      
 0.775
CDCP2
CUB domain containing protein 2.
    
 0.728
GPR151
G protein-coupled receptor 151.
      
 0.686
BTNL9
Butyrophilin like 9.
   
  
 0.669
CCDC73
Coiled-coil domain containing 73.
      
 0.639
KLHL14
Kelch like family member 14.
      
 0.630
MRPL13
Mitochondrial ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
     
 0.626
LRRC20
Leucine rich repeat containing 20.
    
 0.616
FAM111B
Family with sequence similarity 111 member B.
      
 0.614
RNF139
Ring finger protein 139.
      
 0.609
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.