STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSMD3CUB and Sushi multiple domains 3. (3707 aa)    
Predicted Functional Partners:
TRIM77
Tripartite motif containing 77.
      
 0.792
PKHD1L1
PKHD1 like 1.
      
 0.775
PALM3
Paralemmin 3.
    
 0.750
OR2T2
Olfactory receptor.
     
 0.699
TSSC4
Tumor suppressing subtransferable candidate 4.
      
 0.687
ZHX2
Zinc fingers and homeoboxes 2.
      
 0.662
LRP1B
LDL receptor related protein 1B.
   
  
 0.658
XIRP2
Xin actin binding repeat containing 2.
    
 0.628
ZNF831
Zinc finger protein 831.
    
 
 0.611
RNF139
Ring finger protein 139.
    
 
 0.592
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.