STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT2D1Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family. (159 aa)    
Predicted Functional Partners:
STX5
Syntaxin 5; Belongs to the syntaxin family.
    
 
 0.750
STX16
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 
 0.745
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
   0.724
CTDNEP1
CTD nuclear envelope phosphatase 1.
      
 0.710
GOLT1A
Golgi transport 1A.
   
 
 0.693
P4HA1
Prolyl 4-hydroxylase subunit alpha 1.
      
 0.690
KISS1
Kisspeptin.
   
 
 0.665
GOLT1B
Golgi transport 1B.
   
 
 0.665
LOC475497
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 
 0.646
J9JHF3_CANLF
Longin domain-containing protein; Belongs to the synaptobrevin family.
    
 
 0.646
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.