STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UPK3AUroplakin 3A. (288 aa)    
Predicted Functional Partners:
UPK2
Uroplakin 2.
   
 
 0.966
UPK1B
Tetraspanin.
   
 
 0.957
UPK1A
Uroplakin 1A; Belongs to the tetraspanin (TM4SF) family.
   
 
 0.940
SNX31
Sorting nexin 31.
    
 
 0.789
KRT20
Keratin 20; Belongs to the intermediate filament family.
   
  
 0.635
GGT5
Uncharacterized protein.
      
 0.632
MAB21L1
Mab-21 like 1.
      
 0.563
NAP1L5
Nucleosome assembly protein 1 like 5; Belongs to the nucleosome assembly protein (NAP) family.
      
 0.559
GCSAM
Germinal center associated signaling and motility.
      
 0.528
TMEM14A
Uncharacterized protein.
      
 0.522
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.