STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFCAB6EF-hand calcium binding domain 6. (1528 aa)    
Predicted Functional Partners:
C20H19orf71
Chromosome 20 C19orf71 homolog.
    
 
 0.960
EFHC2
EF-hand domain containing 2.
    
 
 0.947
EFCAB1
EF-hand calcium binding domain 1.
   
 
 0.936
TEKT3
Tektin 3.
   
 
 0.920
CCDC114
Coiled-coil domain containing 114.
   
 
 0.918
LOC490081
Uncharacterized protein.
   
 
 0.918
RIBC2
RIB43A domain with coiled-coils 2.
   
 
 0.918
TTC25
Tetratricopeptide repeat domain 25.
   
 
 0.912
TEKT2
Tektin 2.
   
 
 0.910
EFHC1
EF-hand domain containing 1.
   
 
 0.905
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.