SCUBE1 protein (Canis lupus familiaris) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

SCUBE1

Signal peptide, CUB domain and EGF like domain containing 1. (1001 aa)

Predicted Functional Partners:

GCC2

0.742

ARID4B

0.676

USH1C

0.596

IRX3

0.589

HIVEP3

0.569

GPR84

0.561

EYS-2

0.559

SALL4

0.557

MPDZ

0.550

MYH15

0.530

Your Current Organism:

Canis lupus familiaris

NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARID4B	GPR84	ENSCAFP00000016861	ENSCAFP00000009750	AT-rich interaction domain 4B.	G protein-coupled receptor 84.	0.812
ARID4B	HIVEP3	ENSCAFP00000016861	ENSCAFP00000003747	AT-rich interaction domain 4B.	Human immunodeficiency virus type I enhancer binding protein 3.	0.656
ARID4B	IRX3	ENSCAFP00000016861	ENSCAFP00000013907	AT-rich interaction domain 4B.	Iroquois homeobox 3.	0.617
ARID4B	SALL4	ENSCAFP00000016861	ENSCAFP00000017287	AT-rich interaction domain 4B.	Spalt like transcription factor 4.	0.878
ARID4B	SCUBE1	ENSCAFP00000016861	ENSCAFP00000001290	AT-rich interaction domain 4B.	Signal peptide, CUB domain and EGF like domain containing 1.	0.676
ARID4B	USH1C	ENSCAFP00000016861	ENSCAFP00000013248	AT-rich interaction domain 4B.	USH1 protein network component harmonin.	0.581
EYS-2	SCUBE1	ENSCAFP00000052143	ENSCAFP00000001290	Uncharacterized protein.	Signal peptide, CUB domain and EGF like domain containing 1.	0.559
GCC2	SCUBE1	ENSCAFP00000059701	ENSCAFP00000001290	GRIP and coiled-coil domain containing 2.	Signal peptide, CUB domain and EGF like domain containing 1.	0.742
GPR84	ARID4B	ENSCAFP00000009750	ENSCAFP00000016861	G protein-coupled receptor 84.	AT-rich interaction domain 4B.	0.812
GPR84	HIVEP3	ENSCAFP00000009750	ENSCAFP00000003747	G protein-coupled receptor 84.	Human immunodeficiency virus type I enhancer binding protein 3.	0.810
GPR84	IRX3	ENSCAFP00000009750	ENSCAFP00000013907	G protein-coupled receptor 84.	Iroquois homeobox 3.	0.735
GPR84	SALL4	ENSCAFP00000009750	ENSCAFP00000017287	G protein-coupled receptor 84.	Spalt like transcription factor 4.	0.692
GPR84	SCUBE1	ENSCAFP00000009750	ENSCAFP00000001290	G protein-coupled receptor 84.	Signal peptide, CUB domain and EGF like domain containing 1.	0.561
GPR84	USH1C	ENSCAFP00000009750	ENSCAFP00000013248	G protein-coupled receptor 84.	USH1 protein network component harmonin.	0.771
HIVEP3	ARID4B	ENSCAFP00000003747	ENSCAFP00000016861	Human immunodeficiency virus type I enhancer binding protein 3.	AT-rich interaction domain 4B.	0.656
HIVEP3	GPR84	ENSCAFP00000003747	ENSCAFP00000009750	Human immunodeficiency virus type I enhancer binding protein 3.	G protein-coupled receptor 84.	0.810
HIVEP3	IRX3	ENSCAFP00000003747	ENSCAFP00000013907	Human immunodeficiency virus type I enhancer binding protein 3.	Iroquois homeobox 3.	0.608
HIVEP3	SALL4	ENSCAFP00000003747	ENSCAFP00000017287	Human immunodeficiency virus type I enhancer binding protein 3.	Spalt like transcription factor 4.	0.478
HIVEP3	SCUBE1	ENSCAFP00000003747	ENSCAFP00000001290	Human immunodeficiency virus type I enhancer binding protein 3.	Signal peptide, CUB domain and EGF like domain containing 1.	0.569
HIVEP3	USH1C	ENSCAFP00000003747	ENSCAFP00000013248	Human immunodeficiency virus type I enhancer binding protein 3.	USH1 protein network component harmonin.	0.572