STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL11A2Collagen type XI alpha 2 chain. (1733 aa)    
Predicted Functional Partners:
COL2A1
Collagen type II alpha 1 chain.
  
0.893
COL11A1
Collagen type XI alpha 1 chain.
  
  
0.807
COL16A1
Collagen type XVI alpha 1 chain.
  
0.717
ITGA10
Integrin subunit alpha 10; Belongs to the integrin alpha chain family.
    
 0.716
PCOLCE
Procollagen C-endopeptidase enhancer.
   
 0.637
SLC13A1
Solute carrier family 13 member 1.
      
 0.629
COL24A1
Collagen type XXIV alpha 1 chain.
  
 
0.624
COL21A1
Collagen type XXI alpha 1 chain.
  
0.620
COL9A2
Collagen type IX alpha 2 chain.
  
0.619
COL8A2
Collagen type VIII alpha 2 chain.
  
0.616
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.