STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM162BFamily with sequence similarity 162 member B. (155 aa)    
Predicted Functional Partners:
USP32
Ubiquitin specific peptidase 32; Belongs to the peptidase C19 family.
    
 
 0.789
WDR7
WD repeat domain 7.
    
 
 0.765
SCFD1
Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.710
ZPLD1
Zona pellucida like domain containing 1.
      
 0.670
TENT5A
Terminal nucleotidyltransferase 5A.
   
  
 0.654
PEX13
KIAA1841.
      
 0.621
ZUP1
Zinc finger containing ubiquitin peptidase 1.
   
 
 0.619
TIMM44
Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family.
      
 0.609
GOLGA5
Golgin A5.
      
 0.604
CCDC91
Coiled-coil domain containing 91.
      
 0.579
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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